DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3d2 and AT4G20980

DIOPT Version :9

Sequence 1:NP_731675.1 Gene:eIF3d2 / 41475 FlyBaseID:FBgn0037994 Length:551 Species:Drosophila melanogaster
Sequence 2:NP_001031683.1 Gene:AT4G20980 / 827845 AraportID:AT4G20980 Length:591 Species:Arabidopsis thaliana


Alignment Length:598 Identity:231/598 - (38%)
Similarity:341/598 - (57%) Gaps:98/598 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VEYNEHGWGPCEVPEL----------------DVPYQPFCKSDRLGKICDWTAMVPEKKFPSKYA 60
            |.:|..||||.:..::                :||:..|.:||:||::.|||..:..   ||...
plant    11 VPFNSDGWGPPDASDVSSSASPTSVAAANLLPNVPFASFSRSDKLGRVADWTRNLSN---PSARP 72

  Fly    61 STFGNNSQYAYF------------------YEDDDSTFHLVDTTGSKATKPYQRGRYRPNMRNN- 106
            :|...:...|.|                  ..|:|:.|.|||      .||..|.::.|..|.| 
plant    73 NTGSKSDPSAVFDFSAFAIDEGFGLASSGGNPDEDAAFRLVD------GKPPPRPKFGPKWRFNP 131

  Fly   107 --------------VRSRGRTGRGTPNIASLGGSTAGGATASTTKYGKGR---NTRNTQNMGRRF 154
                          |.::.|                   .|...:..:.|   |.||..:..|| 
plant   132 HHNRNQLPQRRDEEVEAKKR-------------------DAEKERARRDRLYNNNRNNIHHQRR- 176

  Fly   155 GRNAPTRIRESSVMVQSDWVSIEEIDFPRLLKLALPNIKDGKDIATCGWLEFYDKLYDRVNLRNE 219
                .....:|||.:|.:|..:|:|.|....||:. .:::.:|:..||.||:|::|:||:..:||
plant   177 ----EAAAFKSSVDIQPEWNMLEQIPFSTFSKLSY-TVQEPEDLLLCGGLEYYNRLFDRITPKNE 236

  Fly   220 KPLQKM-DRVVHTVTTTDDPVIRRLSR-TMGNVFATDEILSTIMCCTRSNYSWDVVVEKLGTKVF 282
            :.|::. :|....|||:||||||||:: ....|||||.||:.:||..||.||||:|::::|.|:|
plant   237 RRLERFKNRNFFKVTTSDDPVIRRLAKEDKATVFATDAILAALMCAPRSVYSWDIVIQRVGNKLF 301

  Fly   283 LDKRYNDQFDLLTVNETSVEPPMDEEGSINSAHSLAMEATLINHNFSQQVL-RIGDQEPRFMFEE 346
            .|||...|.|||:|:|||.||..:.:..|||||||.:||..||.||||||| |.|.:|   .|:|
plant   302 FDKRDGSQLDLLSVHETSQEPLPESKDDINSAHSLGVEAAYINQNFSQQVLVRDGKKE---TFDE 363

  Fly   347 PNPFEEPGVDLASIGYRYRQWDLGNDVVLIARCKHNGVIQGPNGDVQFLSIKALNEWDSKVTNSV 411
            .|||...|.::||:.||||:|.|.:::.|:|||:...|.. .|....||::.||||:|.|. :.|
plant   364 ANPFANEGEEIASVAYRYRRWKLDDNMHLVARCELQSVAD-LNNQRSFLTLNALNEFDPKY-SGV 426

  Fly   412 EWRQKLDTQRGAVLASELRNNACKLARWTVEAVLAGSDQLKLGYVSRMNPRDHLRHVILGTQQFK 476
            :|||||:||||||||:||:||..|||:||.:|:||.:|.:|:|:|||::||||..||||....:|
plant   427 DWRQKLETQRGAVLATELKNNGNKLAKWTAQALLANADMMKIGFVSRVHPRDHFNHVILSVLGYK 491

  Fly   477 PQEFATQINLNMDNAWGVLRCLIDLVMRQPDGKYLIMKDPNKPMIRLYDVPENAFDSDGDE---- 537
            |::||.|||||..|.||:::.::||.|:..:|||:::|||:||.:|:|:||.:||::|..|    
plant   492 PKDFAGQINLNTSNMWGIVKSIVDLCMKLSEGKYVLVKDPSKPQVRIYEVPPDAFENDYVEEPLP 556

  Fly   538 EEESSDPLSNSND 550
            |:|...|...:.:
plant   557 EDEQVQPTEENTE 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3d2NP_731675.1 eIF-3_zeta 7..525 CDD:282888 221/567 (39%)
AT4G20980NP_001031683.1 eIF-3_zeta 6..540 CDD:398661 221/567 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 397 1.000 Domainoid score I139
eggNOG 1 0.900 - - E1_KOG2479
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 412 1.000 Inparanoid score I450
OMA 1 1.010 - - QHG53861
OrthoDB 1 1.010 - - D1030308at2759
OrthoFinder 1 1.000 - - FOG0004086
OrthoInspector 1 1.000 - - mtm989
orthoMCL 1 0.900 - - OOG6_102252
Panther 1 1.100 - - O PTHR12399
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2834
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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