DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3d2 and Eif3d

DIOPT Version :10

Sequence 1:NP_731675.1 Gene:eIF3d2 / 41475 FlyBaseID:FBgn0037994 Length:551 Species:Drosophila melanogaster
Sequence 2:NP_061219.2 Gene:Eif3d / 55944 MGIID:1933181 Length:548 Species:Mus musculus


Alignment Length:550 Identity:295/550 - (53%)
Similarity:394/550 - (71%) Gaps:23/550 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 APFIKPYVEYNEHGWGPCEVPE--LDVPYQPFCKSDRLGKICDWT-AMVPEKKFPSKYASTFGNN 66
            |.|:.|.::.|..|||||.|||  .|:|||||.|.|||||:.||| |...:|::.:||:|.||..
Mouse     2 AKFMTPVIQDNPSGWGPCAVPEQFRDMPYQPFSKGDRLGKVADWTGATYQDKRYTNKYSSQFGGG 66

  Fly    67 SQYAYFYEDDDSTFHLVDTTGSKATKPYQRGRYRPNMRNNVRSRGRTGRGTPNIASLGGSTAGGA 131
            ||||||:|:|:::|.||||..::.| .|||.|.|...||..|.:.|......|:.:|        
Mouse    67 SQYAYFHEEDETSFQLVDTARTQKT-AYQRNRMRFAQRNLRRDKDRRNMVQFNLQTL-------- 122

  Fly   132 TASTTKYGKGRNTRNTQNMGRRFG-----RNAPTRIRESSVMVQSDWVSIEEIDFPRLLKLALPN 191
             ..:.|..:....|..:...::||     .....:.|:|||.|:|||...||:|||:|:|:....
Mouse   123 -PKSAKQKERERIRLQKKFQKQFGVRQKWDQKSQKPRDSSVEVRSDWEVKEEMDFPQLMKMRYLE 186

  Fly   192 IKDGKDIATCGWLEFYDKLYDRVNLRNEKPLQKMDRVVHTVTTTDDPVIRRLSRTMGNVFATDEI 256
            :.:.:||..||.||:|||.:||:..|:||||:.:.|:.||||||||||||:|::|.|||||||.|
Mouse   187 VSEPQDIECCGALEYYDKAFDRITTRSEKPLRSIKRIFHTVTTTDDPVIRKLAKTQGNVFATDAI 251

  Fly   257 LSTIMCCTRSNYSWDVVVEKLGTKVFLDKRYNDQFDLLTVNETSVEPPMDEEGSINSAHSLAMEA 321
            |:|:|.||||.||||:||:::|:|:|.|||.|..||||||:||:.|||.||..|.||..:|||||
Mouse   252 LATLMSCTRSVYSWDIVVQRVGSKLFFDKRDNSDFDLLTVSETANEPPQDEGNSFNSPRNLAMEA 316

  Fly   322 TLINHNFSQQVLRIGDQEPRFMFEEPNPFEEPGVD---LASIGYRYRQWDLGNDVVLIARCKHNG 383
            |.||||||||.||:|.:  |:.|..||||.|..:|   :||:.||||:|.||:|:.||.||:|:|
Mouse   317 TYINHNFSQQCLRMGRE--RYNFPNPNPFVEDDMDKNEIASVAYRYRRWKLGDDIDLIVRCEHDG 379

  Fly   384 VIQGPNGDVQFLSIKALNEWDSKVTNSVEWRQKLDTQRGAVLASELRNNACKLARWTVEAVLAGS 448
            |:.|.||:|.|::||.||||||:..|.|:||||||:|||||:|:||:||:.||||||..|:||||
Mouse   380 VMTGANGEVSFINIKTLNEWDSRHCNGVDWRQKLDSQRGAVIATELKNNSYKLARWTCCALLAGS 444

  Fly   449 DQLKLGYVSRMNPRDHLRHVILGTQQFKPQEFATQINLNMDNAWGVLRCLIDLVMRQPDGKYLIM 513
            :.||||||||.:.:|..||||||||||||.|||:||||:::||||:|||:||:.|:..:|||||:
Mouse   445 EYLKLGYVSRYHVKDSSRHVILGTQQFKPNEFASQINLSVENAWGILRCVIDICMKLEEGKYLIL 509

  Fly   514 KDPNKPMIRLYDVPENAFDSDGDEEEESSD 543
            |||||.:||:|.:|:..|.|:.|||:|..:
Mouse   510 KDPNKQVIRVYSLPDGTFSSEEDEEDEEEE 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3d2NP_731675.1 eIF-3_zeta 7..525 CDD:461547 286/528 (54%)
Eif3dNP_061219.2 eIF-3_zeta 4..521 CDD:461547 286/528 (54%)
RNA gate. /evidence=ECO:0000250|UniProtKB:K7IM66 285..299 9/13 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 523..548 7/16 (44%)

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