DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3d2 and eif3d

DIOPT Version :10

Sequence 1:NP_731675.1 Gene:eIF3d2 / 41475 FlyBaseID:FBgn0037994 Length:551 Species:Drosophila melanogaster
Sequence 2:NP_956310.1 Gene:eif3d / 336498 ZFINID:ZDB-GENE-030131-8442 Length:552 Species:Danio rerio


Alignment Length:560 Identity:299/560 - (53%)
Similarity:391/560 - (69%) Gaps:26/560 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 APFIKPYVEYNEHGWGPCEVPE--LDVPYQPFCKSDRLGKICDWT-AMVPEKKFPSKYASTFGNN 66
            |.|..|.::.|..|||||.|||  .|:|||||.|.|||||:.||| |...:|::.:||:|.||..
Zfish     2 AKFHAPVIQDNPSGWGPCAVPEKFKDMPYQPFSKGDRLGKVADWTGATYQDKRYTNKYSSQFGGG 66

  Fly    67 SQYAYFYEDDDSTFHLVDTTGSKATKPYQRGRYRPNMRNNVRSRGRTGRGTPNIASLGGSTAGGA 131
            ||||||:|:|:::|.||||..::.| .|||.|.|...||..|.:.|......|:.:|        
Zfish    67 SQYAYFHEEDEASFQLVDTAKTQKT-AYQRNRMRFAQRNLRRDKDRRTLTQFNMQTL-------- 122

  Fly   132 TASTTKYGKGRNTRNTQNMGRRFG--------RNAPTRIRESSVMVQSDWVSIEEIDFPRLLKLA 188
             ..:.|..:....|..:...::||        ..|..:.|:|||.|:|||...||:|||||:|:.
Zfish   123 -PKSAKQKERDRMRLQKKFQKQFGVRQKWDQKSQAQLKPRDSSVEVRSDWEVKEEMDFPRLMKMR 186

  Fly   189 LPNIKDGKDIATCGWLEFYDKLYDRVNLRNEKPLQKMDRVVHTVTTTDDPVIRRLSRTMGNVFAT 253
            ..::.|..||..||.||.|||.:||:..||||||:.:.|:.||||||||||||:|::|.||||||
Zfish   187 YMDVADPLDIECCGALEHYDKAFDRITTRNEKPLKSIKRIFHTVTTTDDPVIRKLAKTQGNVFAT 251

  Fly   254 DEILSTIMCCTRSNYSWDVVVEKLGTKVFLDKRYNDQFDLLTVNETSVEPPMDEEGSINSAHSLA 318
            |.||:|:||||||..|||::|:::|.|:|.|||.|..||||||:||:.|||.||..|:||..:||
Zfish   252 DAILATLMCCTRSVNSWDIIVQRVGNKLFFDKRDNSDFDLLTVSETANEPPQDEGSSLNSPRNLA 316

  Fly   319 MEATLINHNFSQQVLRIGDQEPRFMFEEPNPFEEPGV---DLASIGYRYRQWDLGNDVVLIARCK 380
            ||||.||||||||.||:|.:  |:.|..||||.|...   ::||:.||||:|.||.|:.||.||:
Zfish   317 MEATYINHNFSQQCLRMGGE--RYKFPNPNPFVEEDTEKSEVASVAYRYRRWKLGEDIDLIVRCE 379

  Fly   381 HNGVIQGPNGDVQFLSIKALNEWDSKVTNSVEWRQKLDTQRGAVLASELRNNACKLARWTVEAVL 445
            |:||:.|.||:|.|:::|.||||||:..|.|:||||||:|||||||:||:||:.||||||..|:|
Zfish   380 HDGVMTGANGEVSFINVKTLNEWDSRYCNGVDWRQKLDSQRGAVLATELKNNSYKLARWTCCAIL 444

  Fly   446 AGSDQLKLGYVSRMNPRDHLRHVILGTQQFKPQEFATQINLNMDNAWGVLRCLIDLVMRQPDGKY 510
            |||:.||||||||.:.:|..|||:||||||||.|||:||||:|:||||:|||:||:..:..:|||
Zfish   445 AGSEYLKLGYVSRYHVKDSSRHVVLGTQQFKPNEFASQINLSMENAWGILRCVIDICRKLDEGKY 509

  Fly   511 LIMKDPNKPMIRLYDVPENAFDSDGDEEEESSDPLSNSND 550
            ||:|||||.:||:|.:|:..|.||.||||:..|......|
Zfish   510 LILKDPNKQVIRVYSLPDGTFSSDEDEEEDDEDEEDEEED 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3d2NP_731675.1 eIF-3_zeta 7..525 CDD:461547 287/531 (54%)
eif3dNP_956310.1 eIF-3_zeta 4..524 CDD:461547 287/531 (54%)
RNA gate. /evidence=ECO:0000250|UniProtKB:K7IM66 288..302 9/13 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 525..552 10/25 (40%)

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