DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3d2 and eif-3.D

DIOPT Version :9

Sequence 1:NP_731675.1 Gene:eIF3d2 / 41475 FlyBaseID:FBgn0037994 Length:551 Species:Drosophila melanogaster
Sequence 2:NP_498984.1 Gene:eif-3.D / 176268 WormBaseID:WBGene00001227 Length:570 Species:Caenorhabditis elegans


Alignment Length:568 Identity:244/568 - (42%)
Similarity:328/568 - (57%) Gaps:43/568 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 NEHGWGP------CEVPELDVPYQPFCKSDRLGKICDWTAM------VPEKKFPSKYASTFGNNS 67
            |..||||      .:.|   ||:|.|.|:||:|::.||..:      ..|:.....|.|.....|
 Worm    14 NTVGWGPLASSSSADEP---VPFQQFNKADRIGRVADWIGVDRFYRRGNERYNERVYGSAANAGS 75

  Fly    68 QYAYFYEDDDSTFHLVDTTGSKATKPYQRGR-----YRPNMRNNVRSRGRTGRGTPNIASLGGST 127
            |:.|.:..|:..|.||||:...|..|.:..|     .|..|:.....|....:.| |:.......
 Worm    76 QFDYIHGMDEHNFQLVDTSKPMARNPQRNFRVRQMHLRKMMQKENEKREMVNQST-NLRMKRSIA 139

  Fly   128 AGGATASTTKYGKGRNTRNTQ-NMGRRFGRNAPTRIRESSVMVQSDWVSIEEIDFPRLLKLALPN 191
            .....|......:|.|.|..| ..|.|||.:.| :.|..||.|:.:||.:||::.....||||||
 Worm   140 KEQQRAFKMWQRRGGNARQGQRGQGGRFGGDRP-KERLPSVQVRPEWVVLEEMNLSAFSKLALPN 203

  Fly   192 IKDGKDIA--TCGWLEFYDKLYDRVNLRNEKPLQKMDRVVHTVTTTDDPVIRRLSR-TMGNVFAT 253
            |..|.||.  ..|.|::|||..|||:::|..|||:...|.:.||||:||||:.|:: ..||||.|
 Worm   204 IPGGDDIGDHQYGSLQYYDKTIDRVSVKNSIPLQRCAGVFYNVTTTEDPVIQELAQGGAGNVFGT 268

  Fly   254 DEILSTIMCCTRSNYSWDVVVEKLGTKVFLDKRYN----DQFDLLTVNETSVEPPMDEEGSINSA 314
            |.||:|:|...||.||||:|..::|.|:|.|||..    :..:.|||:|||.|||..:...||:|
 Worm   269 DIILATLMTAPRSVYSWDIVAYRVGDKLFFDKRNTRDILNPVETLTVSETSAEPPSFDGNGINNA 333

  Fly   315 HSLAMEATLINHNFSQQVLRIGDQEPRFMFEEPN-PFEEPGVDLASIGYRYRQWDLGN-----DV 373
            ..||.||..||.||.:||::..|  ..|.|:... |||:.....:...|:||:|:|||     .|
 Worm   334 KDLATEAFYINQNFRRQVVKRND--AGFTFKNARAPFEDEETGESGTAYKYRKWNLGNGVDGKPV 396

  Fly   374 VLIARCKHNGVIQGPNGDVQFLSIKALNEWDSKVTNSVEWRQKLDTQRGAVLASELRNNACKLAR 438
            .|:.|.:.:|||.|...:.|.|:|||.|||||..:..|:||.|||.|:|||:|:|::||:.|:|:
 Worm   397 ELVCRTELDGVIHGLGNETQTLTIKAFNEWDSTQSGGVDWRTKLDVQKGAVMATEIKNNSAKVAK 461

  Fly   439 WTVEAVLAGSDQLKLGYVSRMNPRDHLRHVILGTQQFKPQEFATQINLNMDNAWGVLRCLIDLVM 503
            ||::|:|||||.:|||||||.|.|....|.||.||..||.|||:.|.|||||.||:|||:||..|
 Worm   462 WTLQALLAGSDTMKLGYVSRNNARSTQNHSILLTQYVKPTEFASNIALNMDNCWGILRCVIDSCM 526

  Fly   504 RQPDGKYLIMKDPNKPMIRLYDVPENAFDSDGDEEEESSDPLSNSNDN 551
            :|..||||:||||..|:||||.:||..|:|    |.||||. .||:|:
 Worm   527 KQKPGKYLLMKDPQSPVIRLYSLPEGTFES----ERESSDE-ENSDDD 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3d2NP_731675.1 eIF-3_zeta 7..525 CDD:282888 231/540 (43%)
eif-3.DNP_498984.1 eIF-3_zeta 6..548 CDD:282888 231/540 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167159
Domainoid 1 1.000 429 1.000 Domainoid score I303
eggNOG 1 0.900 - - E1_KOG2479
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 447 1.000 Inparanoid score I908
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53861
OrthoDB 1 1.010 - - D1030308at2759
OrthoFinder 1 1.000 - - FOG0004086
OrthoInspector 1 1.000 - - otm14315
orthoMCL 1 0.900 - - OOG6_102252
Panther 1 1.100 - - O PTHR12399
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R379
SonicParanoid 1 1.000 - - X2834
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.840

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