DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cpn and Vwce

DIOPT Version :9

Sequence 1:NP_731674.1 Gene:Cpn / 41474 FlyBaseID:FBgn0261714 Length:864 Species:Drosophila melanogaster
Sequence 2:NP_082189.1 Gene:Vwce / 71768 MGIID:1919018 Length:929 Species:Mus musculus


Alignment Length:790 Identity:169/790 - (21%)
Similarity:240/790 - (30%) Gaps:277/790 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 VAVAQIPVAVSAPVA-------PPVAATPTPVAPIPVAAPVIATPPVAASAPTPAAVTPVVSPVI 159
            |:....|.||.||.|       |...:...|.|..|..:|..:.||.|...||  .|..:..|  
Mouse   259 VSCEAFPKAVLAPSAILQPRQHPAKMSLLLPEAGRPALSPGHSPPPGAPGYPT--GVRTISQP-- 319

  Fly   160 ATPPVVPANTTVPVAAPVAAVPAAVPVVAPVLAPAVAPAVAPVVAETPAPPPVAEIPV------- 217
            :|..|:|  |..|.......||::.|:  ..|.|   |::......||:.|...|.|.       
Mouse   320 STTQVLP--TFFPTQLISTPVPSSSPL--GTLGP---PSLLQGAVGTPSSPRGPESPKLGAGSSS 377

  Fly   218 -----ATI--------PECVAPLIPEVSVV-------ATKPLAAAEPVVVAPP------------ 250
                 ||.        |.|...|..:..|.       ||    .:.||   ||            
Mouse   378 CWHLGATYESGSRWNQPGCSQCLCQDGEVTCGGVRCDAT----CSHPV---PPRDGGCCPSCTGC 435

  Fly   251 ------ATETPVVAPAAASPHVSVAPAVETAVVAPVSASTEPPVAAATLTTAPETPALAPVVAE- 308
                  ..|..|.:|...:..|.|..|...:.::|..    ||   .....:|::.....|... 
Mouse   436 FHSGAIRAEGDVFSPPEENCTVCVCLAGNVSCISPEC----PP---GPCKASPQSDCCTCVPGRC 493

  Fly   309 ---------------------SQVAANTVVATPPTPAPEPE------TIAPPVVAETPEVASVAV 346
                                 :.|..|..|....||.||.|      .:.|.....|       .
Mouse   494 YFHGRWYTDGAVFSGGGDDCTTCVCQNGEVECSFTPCPELECPREEWLLGPGQCCFT-------C 551

  Fly   347 AETTPPVVPPVAAESIPAPV--VATTPVPATLAVTDPDVTAS-----AVPELP-PVIAPSP-VPS 402
            .|.||.....:....:..|:  :.:...|..|.|...|.:.|     .|...| |:..|.. .|.
Mouse   552 REPTPTTGCSLDDNGVEFPIGQIWSPGDPCELCVCQADGSVSCKRTDCVDSCPHPIRIPGQCCPD 616

  Fly   403 AVA------------ETPVDLAPPVLPP----------VAAEPVPAVVAEETPETPAPASAPV-- 443
            ..|            ||    .|.||.|          ||..||...:....|..|.....||  
Mouse   617 CSAGCTYTGRIFYNNET----FPSVLDPCLSCICLLGSVACSPVDCPITCTYPFHPDGECCPVCH 677

  Fly   444 ------------TIAALDIPEVAPVIAAPSDAPAEAPSAAAPIVSTPPTTASVPETTAPPAAVPT 496
                        .:..||.......|....:...|          |.|......:.:.|.:..|.
Mouse   678 DCNFEGRKVVNGQVFTLDDEPCTRCICQLGEVSCE----------TVPCRPICTDPSCPDSVFPL 732

  Fly   497 E----PIDVSVLSEAAIETPVAPPVEVTTEVAV---ADVAPPEAAADLIIEPVEPPAPIPDLLEQ 554
            |    |.....|::||..      ....|||.|   :...||.|:         |..|:..||::
Mouse   733 EEKQQPSPHGELAKAARN------ARGDTEVPVNCSSCPGPPSAS---------PTRPMVHLLQR 782

  Fly   555 --TTSVPAVEAAESTSSPIPETSLPPPNEAVASPE-VAVAPITAPEPIPEPEPSLATPTEPIPVE 616
              .|::..:::| |.|.||.:||..|    :..|| :::....|.:|   ||||..:|..|    
Mouse   783 LLRTNLSNIQSA-SPSPPIAQTSSSP----LLEPEGISLGKPRASQP---PEPSAGSPVSP---- 835

  Fly   617 APVVIQEAVDAVEVPVTETSTSIPETTVEYPVAEKVLDPAITEAPVTTQEPDVANINDG------ 675
                             ..||               |.|||...|::...|:.::...|      
Mouse   836 -----------------RLST---------------LPPAIPGTPLSPVTPESSSSTFGTQTAFQ 868

  Fly   676 -----APATEITTPAVEIVTAAAEVSDT------------AIPLIDPPVPQEIAVAEIPETETKP 723
                 .|.||..||::    ..|::|:|            |:|....||||:..:    :|..| 
Mouse   869 WLLSATPLTEAETPSM----TNADLSETLTTSSSSQRLSAALPDTPNPVPQQSTI----DTPKK- 924

  Fly   724 AEVIVEQSTI 733
                 |.|||
Mouse   925 -----ENSTI 929

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CpnNP_731674.1 rne <9..167 CDD:236766 21/71 (30%)
rne <109..300 CDD:236766 55/242 (23%)
rne <228..409 CDD:236766 45/254 (18%)
rne <331..594 CDD:236766 66/317 (21%)
rne <501..763 CDD:236766 62/262 (24%)
VwceNP_082189.1 EGF_CA 142..180 CDD:214542
cEGF 200..223 CDD:289433
EGF_CA 220..262 CDD:214542 1/2 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 291..317 9/27 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 339..374 10/39 (26%)
VWC 378..432 CDD:302663 12/60 (20%)
VWC 493..551 CDD:302663 10/64 (16%)
VWC 564..617 CDD:214564 11/52 (21%)
VWC 621..676 CDD:302663 13/58 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 731..774 14/57 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 791..861 26/113 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 879..929 15/63 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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