DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpn and otogl

DIOPT Version :9

Sequence 1:NP_731674.1 Gene:Cpn / 41474 FlyBaseID:FBgn0261714 Length:864 Species:Drosophila melanogaster
Sequence 2:XP_021328895.1 Gene:otogl / 555569 ZFINID:ZDB-GENE-050419-93 Length:2556 Species:Danio rerio


Alignment Length:368 Identity:89/368 - (24%)
Similarity:120/368 - (32%) Gaps:103/368 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   265 HVSVAPAVETAVVAPVSAST---EPPVAAATLTTAPETPALAPVVAESQVAANTVVATPPTPAP- 325
            |...:|.|:|.  :.:.|:.   .|||... ....|:|..|..|.... |.....|...|||.| 
Zfish  1392 HACSSPCVKTC--SDLDATRCHFLPPVEGC-FPRCPKTMLLDEVTRRC-VYKEDCVMLSPTPTPY 1452

  Fly   326 -----EPETIAPPVVAETPEVASVAVAETTPPVVPPVAAESIPAPVVATTPVPATLAVTDPDVTA 385
                 ...|.|.|..|.|...::.....|| ...|..|..:..:..:.|||..|.:.:..|..|.
Zfish  1453 MFVTRSNRTTAAPTTAPTTTTSTTTTPSTT-TATPSTAPTTTSSTTIITTPSEAAVLIVSPTTTT 1516

  Fly   386 SAVPELPPVIAPSPVPSAVAETPVDLAPPVLPPVAAEPVPAVVAEETPETPAPASAPVTIAALDI 450
                 |||....|...:...|||...:||                 |.|.|...:||.|.:|   
Zfish  1517 -----LPPTTVSSTTETTSTETPTTSSPP-----------------TTEPPLITTAPPTTSA--- 1556

  Fly   451 PEVAPVIAAPSDAPAEAPSAAAPIVSTPPTTASVPETTAPPAAVPTEPIDVSVLSEAAIETPVAP 515
               .|..|.|:          .||::|.|::.|..|.|....|. |:|       |....|....
Zfish  1557 ---TPTTAKPT----------TPIITTLPSSTSTTEMTTSSEAT-TKP-------ETTSPTTTVQ 1600

  Fly   516 PVEVTTEVAVADVAPPEAAADLIIEPVEPPAPIPDLLEQTTSVPAVEAAESTSSPIPETSLPPPN 580
            |:..||.:......                      ||.||:|...|:          ||:.|..
Zfish  1601 PITTTTVITTESTT----------------------LESTTTVITTES----------TSVSPTT 1633

  Fly   581 EAVASPEVAV---APITAPEPIPEPE--------PSLATPTEP 612
            |..::...||   :.|..|.|.|.||        |....||.|
Zfish  1634 EEPSTTTAAVPTTSEIIIPSPSPSPETAGITTVLPPFLLPTGP 1676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CpnNP_731674.1 rne <9..167 CDD:236766
rne <109..300 CDD:236766 9/37 (24%)
rne <228..409 CDD:236766 39/152 (26%)
rne <331..594 CDD:236766 60/265 (23%)
rne <501..763 CDD:236766 27/123 (22%)
otoglXP_021328895.1 VWD 121..261 CDD:214566
C8 319..381 CDD:312319
TIL 394..442 CDD:307783
VWD 471..636 CDD:214566
C8 679..740 CDD:312319
TIL 747..802 CDD:307783
TIL 845..911 CDD:307783
VWD 951..1097 CDD:306577
C8 1131..1205 CDD:214843
VWD 1729..1901 CDD:214566
C8 1936..2006 CDD:214843
GHB_like 2474..2556 CDD:328788
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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