DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpn and Crim1

DIOPT Version :9

Sequence 1:NP_731674.1 Gene:Cpn / 41474 FlyBaseID:FBgn0261714 Length:864 Species:Drosophila melanogaster
Sequence 2:NP_056615.1 Gene:Crim1 / 50766 MGIID:1354756 Length:1037 Species:Mus musculus


Alignment Length:311 Identity:63/311 - (20%)
Similarity:92/311 - (29%) Gaps:112/311 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   510 ETPVAPPVEVTTEVAVADVAPPEAAADLIIEPVEPPAPIPDLLEQTTSVPAVEAAESTSSPIPET 574
            ||.|.||:.........|...|:...|       ||.|                  |||.     
Mouse   711 ETEVCPPLLCQNPSRTQDSCCPQCTDD-------PPQP------------------STSH----- 745

  Fly   575 SLPPPNEAVAS------PEVAVAPITAPEPIPEPEPSLATPTEPIPVEAPVVIQEAVDAVEVPVT 633
                 ||:|.|      .::.:|               |...:|....:.|.:..|:...     
Mouse   746 -----NESVPSYCRNDEGDIFLA---------------AESWKPDACTSCVCVDSAISCY----- 785

  Fly   634 ETSTSIPETTVEYPVAEK------VLDPAITEAPV------TTQEPDVANINDGAPATEITTPAV 686
              |.|.|....|.||..|      .|:..|.:..|      |..:.:..:|:......     .:
Mouse   786 --SESCPSVACERPVLRKGQCCPYCLEDTIPKKVVCHFSGKTYADEERWDIDSCTHCY-----CL 843

  Fly   687 EIVTAAAEVSDTAIPLIDP--------PVPQEIAVAEIPETETKPAEVIVEQSTIPIEAPVPEVS 743
            :..|..:.||...:|..:|        |:..|:.|   ||....|.|....:..|.:|.|:    
Mouse   844 QGQTLCSTVSCPPLPCAEPIKVEGSCCPMCPEMYV---PEPTNVPIEKKNHRGEIDLEVPM---- 901

  Fly   744 KYAEPVISEAPAAEVPITAG----DNPDNTSVG----------ISEVVPTI 780
               .|..||.....:|...|    |..||..:.          :|.|||.|
Mouse   902 ---WPTPSENDIIHLPRDMGHLQVDYRDNNRLHPGEDSSLDSIVSVVVPII 949

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CpnNP_731674.1 rne <9..167 CDD:236766
rne <109..300 CDD:236766
rne <228..409 CDD:236766
rne <331..594 CDD:236766 19/89 (21%)
rne <501..763 CDD:236766 54/278 (19%)
Crim1NP_056615.1 IB 37..>95 CDD:197525
Cell attachment site. /evidence=ECO:0000255 314..316
VWC 336..390 CDD:214564
VWC 403..456 CDD:214564
Antistasin 539..564 CDD:280912
Antistasin 567..592 CDD:280912
VWC 683..734 CDD:302663 7/22 (32%)
VWC 758..808 CDD:302663 12/71 (17%)
VWC 819..873 CDD:302663 8/58 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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