Protein Alignment Cpn and Rcd2

DIOPT Version :9

• Sequence 1: NP_731674.1
• Gene: Cpn / 41474
• FlyBaseID: FBgn0261714
• Length: 864
• Species: Drosophila melanogaster
• Sequence 2: NP_649244.3
• Gene: Rcd2 / 40283
• FlyBaseID: FBgn0037012
• Length: 452
• Species: Drosophila melanogaster
• Alignment Length: 505
• Identity: 98/505 - (19%)
• Similarity: 151/505 - (29%)
• Gaps: 197/505 - (39%)

  Fly   469 SAAAPIVSTPPTTASVPETTAPPAAVPTEPIDVSVLSEA----AIETPVAPPVEVTTE------- 522
            |.|.||:...    |:.|:.|.|......||...|:.|.    .:.....|..|...|
  Fly    16 SCAMPIIDPD----SIDESLACPPCENDFPICYKVIVEVERGNGLPGSCCPRYECLDEEPVCDGS 76

  Fly   523 --------VAVADVAPPEAAADLIIEPVEPPAPI------------------------------- 548
                    ..|.|...|.|.....|.|:|.|.||
  Fly    77 KRRFYKNKCTVCDPCEPLAIQCKEICPMEEPEPICLSDNNEYHRNGDIWMENNGCTTCMCEGGYV 141

  Fly   549 ---------------------------PDLL--------------EQTTSVPAVEAAES------ 566
                                       ||.|              ..|||.|.:..:||
  Fly   142 TRNAVQCNHYYRCNNPVEVKGQCCPVCPDELGVSNSIYDDGNHKYRNTTSAPILGESESSSSGWS 206

  Fly   567 ------TSSPIPETSLPPPNEAVASPEVAVAPITAPEPIPEPEPSLATPTEPIPVEAPVVIQEAV 625
                  ||..:|:|| ..||.:..|.|                  |||||
  Fly   207 STVPTDTSDSVPDTS-GSPNSSSTSSE------------------LATPT--------------- 237

  Fly   626 DAVEVPVTETSTSIPETTVEYPVAEKVLDPAITEAP--VTTQEPDVANINDGAPATEITTPAVEI 688
                 |.|...:|..|.|......|::.:.|.:|:|  .|..|....:.:|.|..| .|.|....
  Fly   238 -----PNTSELSSSTERTSTDSSYEQLGEFATSESPDLRTDSEEQETSSSDSAMET-TTNPTTFE 296

  Fly   689 VTAAAEVSDTAIPLIDPPVPQEIAVAEI--------PETETKPAEVIVEQSTIPIEAPVPEVSKY 745
            .||.:.||.|::.|   |...:..:.::        |:...:|..::|..:..        :|..
  Fly   297 ATATSTVSSTSMEL---PTATDDGITKMDFNPDGRTPKATDEPTVILVNATNF--------LSVV 350

  Fly   746 AEPVISEAPAAEVPITAGDNPDNTSVGISEVVPTIAEKAVEEVPTSEIPE---QSSSPSDSVPVA 807
            .:..|:..||...|.:.....|..|:.|.::          ..|.:|:|:   |:..|.:.|.:.
  Fly   351 TDNPITNQPAVVAPESTSQIKDLNSMEIQQI----------RYPYAEVPQERIQTDWPLECVVIM 405

  Fly   808 KITPLLRDLQTTDVSLLAI-----------AATLDAIGEKLKDQKARNQQ 846
            ....|:     ..:||.||           |..|:.:.:..:.:||:.:|
  Fly   406 GFVILI-----VFISLYAIVKRYSKNKKYHAIPLNPVRKLNETEKAKTEQ 450

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Cpn	NP_731674.1	rne	<9..167	CDD:236766
		rne	<109..300	CDD:236766
		rne	<228..409	CDD:236766
		rne	<331..594	CDD:236766	43/227 (19%)
		rne	<501..763	CDD:236766	69/374 (18%)
Rcd2	NP_649244.3	VWC	114..168	CDD:214564	0/53 (0%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1216
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.900