DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpn and Muc14A

DIOPT Version :9

Sequence 1:NP_731674.1 Gene:Cpn / 41474 FlyBaseID:FBgn0261714 Length:864 Species:Drosophila melanogaster
Sequence 2:NP_727928.3 Gene:Muc14A / 318097 FlyBaseID:FBgn0052580 Length:16223 Species:Drosophila melanogaster


Alignment Length:699 Identity:132/699 - (18%)
Similarity:246/699 - (35%) Gaps:177/699 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 SPHVSVAPAVETAVVAPVSASTEPPVAAATLTTAPETPALAPVVAESQVAANTVVATPPTPAPEP 327
            :|.:||..::.||......:|.|...|..  .|:..:.:||.:..|...:..      .:.|.|.
  Fly  6241 TPSISVPQSIATANSLLTGSSAEEQTAQE--ETSEHSKSLAQLTTEESSSFQ------ESSAEEN 6297

  Fly   328 ETIAPPVVAETPEVASVAVAETTPPVVPPVAAESIPAPVVA-----TTP--VPATLAVTDPDVTA 385
            :|      .|.|...|.:.::::.......:::|:.....:     |.|  ||.::|.|:..:|.
  Fly  6298 QT------TEVPWTLSTSPSQSSSKTKNIFSSQSVNEDKTSQEDTRTLPISVPQSIATTNSLLTG 6356

  Fly   386 SAVPELPPVIAPSPVPSAVAETPVDLAPPVLPPVAAEPVPAV---VAEETPETPAPASAPVTIAA 447
            |:..|            ..|:.........||.:..|...:.   .|||...|..|.:...:::.
  Fly  6357 SSAEE------------QTAQEETSEHSKSLPQLTTEESSSFQESSAEENQMTEVPWTLSTSLSQ 6409

  Fly   448 LDIPEVAPVIAAPS---DAPAEAPSAAAPIVSTPPTTASVPETTAPPAAVPTEPIDV---SVLSE 506
            ..: :...:.::|:   |..::..:...||        |||::.|...::.|||.::   ..|:|
  Fly  6410 SSL-QAKNIFSSPNLNEDNISQEDTRTLPI--------SVPQSIATANSLLTEPKNIFSSQSLNE 6465

  Fly   507 AAI--ETPVAPPVEVTTEVAVAD------VAPPEAAADLIIEPVEPPAPIPDL-LEQTTSVPAVE 562
            ..|  |....|.:.|:.....|:      :|..:.|.:   |..|....:|.| .|:::|.....
  Fly  6466 DNISQEDTRTPSISVSQSSTTANRLLTGSIAEEQTAQE---ETSEHSKSLPQLTTEESSSFQESS 6527

  Fly   563 AAESTSSPIPETSLPPPNEA-----------------VASPEVAVAPITAPEPIPEPEPSLATPT 610
            |.|:.::.:|.|....|:::                 ::..:....||:.|:.|.... ||.|.:
  Fly  6528 AEENQTTEVPWTLSTSPSQSSSKTKNIFSSPSLNEDNISQEDTRTLPISVPQSIATAN-SLLTGS 6591

  Fly   611 EPIPVEAPVVIQEAVDAVEVPVTETSTSIPETTVEYPVAEKVLDPAITEAPVT--------TQEP 667
            ......|.....|...::....||.|:|..|::.|        :..:||.|.|        :.||
  Fly  6592 SAEEQTAQEETSEHSKSLPQLTTEESSSFQESSAE--------ENQMTEVPWTLSTSLSQSSSEP 6648

  Fly   668 ----DVANINDGAPATEITTPAVEIVTAAAEVSDTAIPLIDPPVPQEIAVAEIPETETKPAEVIV 728
                ...::|:...:.|.|               ..:|:   .|||.||.|....|.:...|...
  Fly  6649 KNIFSSQSLNEDNISQEDT---------------RTLPI---SVPQSIATANSLLTGSSAEEQTA 6695

  Fly   729 EQSTIPIEAPVP-----EVSKYAEPVISEAPAAEVPITAGDNPDNTSVGISEVV--PTIAEKAVE 786
            ::.|......:|     |.|.:.|....|....|||.|...:|..:|.....:.  |::.|..:.
  Fly  6696 QEETSEHSKSLPQLTTEESSSFQESSAEENQTTEVPWTLSTSPSQSSSKTKNIFSSPSLNEDNIS 6760

  Fly   787 EVPTSEIP-------------------------EQSSSPSDSVP--------------------- 805
            :..|..:|                         |::|..|.|:|                     
  Fly  6761 QEDTRTLPISVPQSIATANSLLTGSSAEEQTAQEETSERSKSLPQLTTEESSSFQESSAEENQTT 6825

  Fly   806 ---VAKITPLLRDLQTTDVSLLAIAATLDAI--GEKLKDQKARNQQVMD 849
               |.:......|.:|..:|:....||.:::  |...::|.|:.:...|
  Fly  6826 NQSVNEDKTSQEDTRTLSISVPQSIATTNSLLTGSSAEEQTAQEETSED 6874

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CpnNP_731674.1 rne <9..167 CDD:236766
rne <109..300 CDD:236766 9/36 (25%)
rne <228..409 CDD:236766 29/152 (19%)
rne <331..594 CDD:236766 54/304 (18%)
rne <501..763 CDD:236766 63/307 (21%)
Muc14ANP_727928.3 PRK14949 <11377..11776 CDD:237863
PRK08581 11922..>12215 CDD:236304
PRK14949 <13679..14114 CDD:237863
PRK14949 <14663..15055 CDD:237863
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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