DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cpn and Zan

DIOPT Version :9

Sequence 1:NP_731674.1 Gene:Cpn / 41474 FlyBaseID:FBgn0261714 Length:864 Species:Drosophila melanogaster
Sequence 2:NP_035871.2 Gene:Zan / 22635 MGIID:106656 Length:5420 Species:Mus musculus


Alignment Length:892 Identity:225/892 - (25%)
Similarity:325/892 - (36%) Gaps:231/892 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GTIPSPV--------SAPVAAPVT-PSAVAAPVQVVSPAAVAPAPAAPIAV-------------- 45
            |:.|.|:        |..:.:.|| |.....|:|:...|....:.|..:|:              
Mouse   480 GSFPIPLWNRVGSQSSGWMNSSVTIPKGYQQPMQLFIEATRGTSTAFVVALNFILISHGPCRVLL 544

  Fly    46 ------TPVAPP--------PTLASVQP------ATVTIPAP-APIAAASVAPVASVAPPVVAAP 89
                  :|:.||        |||...||      .||||..| .|...|::....:..|..|...
Mouse   545 QTEIPSSPLLPPTGPSESTVPTLPMEQPTSPTKATTVTIEIPTTPTEEATIPTETTTVPTEVINV 609

  Fly    90 TPPAASPVSTPPVAVAQIPVAVSAPVAPPVAATPTPVAPIP---VAAPVIATPPVAASAPTPAAV 151
            :|   ...|.||...  ||..| ..|:|....:||.|.|:|   .||.|.||    .::|...:|
Mouse   610 SP---KETSIPPEVT--IPTEV-ITVSPEEIISPTEVTPVPTDVTAAYVEAT----NASPEETSV 664

  Fly   152 TPVVSPVIATPPVVPANTTVPVAAPVAAVPA-AVPVVAPVL---APAVAPAVAPVVAETPAPPPV 212
            .|.|:.:.....|.|..||||...|:..:.| |.|.....|   .|.|...|..|..|       
Mouse   665 PPEVTILTEVTTVSPEETTVPTEVPIVLIEATAFPTGETTLYTEVPTVPTEVTGVHTE------- 722

  Fly   213 AEIPVATIPECVAPLIPEVSVVATKPLAAAEPVVVAPPATETPVVAPAAASPHVSVAPAVETAVV 277
                       |..:.||.:.|.|:...:.|...|:|..|..|...|..::...:|:|. ||:| 
Mouse   723 -----------VTNVSPEETSVPTEETISTEVTTVSPEETTLPTEVPTVSTEVTNVSPE-ETSV- 774

  Fly   278 APVSASTEPPVAAATLTTAPETPALAPVV--AESQVAANTVVATPPTPAPEPETIAPPVVAETPE 340
                    ||......|...|.|.:...|  ..::|   |.|:...|..|..|||:..|...:||
Mouse   775 --------PPEETILTTLYTEVPTVPTEVTGVHTEV---TNVSPEETSVPTEETISTEVTTVSPE 828

  Fly   341 VASVAVAETT-PPVVPPVAAESIPAPVVATTPVPATLAVTDPDVTASAVPELPPVIAPSPVPSAV 404
                   ||| |..||.|:.|........|:..|....:|  ::|..:..|....|..:.:|:.|
Mouse   829 -------ETTLPTEVPTVSTEVTNVSPEETSVPPEETILT--EITTVSPEETVFPIEGTTLPTEV 884

  Fly   405 AETPVDL---------APPVLPPVAAEPVPAVVAEETPETPAPASAPVTIAALDIPEVAPVIAAP 460
            ...|:::         .|..:|.|:.| :..|..|.|...|...|.|.        |||.|:  |
Mouse   885 LTVPIEVTTFPTGETTVPTEVPTVSTE-MTGVHTEVTTVFPEETSIPT--------EVATVL--P 938

  Fly   461 SDAPAEAPSAAAPIVSTPPTTASVPE--TTAPPAAVPTEPIDVSVLSEAAIETPVAPPVEVTTEV 523
            :..|.|..:....:.:|||...::|.  ||.||.::|:|            ||  ..|.||||  
Mouse   939 ASIPPEETTTPTEVTTTPPEETTIPAEVTTIPPVSIPSE------------ET--TTPTEVTT-- 987

  Fly   524 AVADVAPPEAAADLIIEPVEPPAPIPDLLEQTTSVPAVE-AAESTSSPIPETSLPPPNEAVASPE 587
                 .|||...            ||   .:.|:||.|. .:|.|::| .|.:..||.|.....|
Mouse   988 -----TPPEETT------------IP---AEVTTVPPVSIPSEETTTP-TEVTTTPPEETTIPAE 1031

  Fly   588 VAVAPITAPEPIPEPEPSLATPTEPIPVEAPVVIQEAVDAVEVPVTETSTSIPETTVEYPVAEKV 652
            |...|   |..||..|.::.|....:|.|                   .|:||......|..|..
Mouse  1032 VTTVP---PVSIPSEETTIPTEVTTVPPE-------------------ETTIPAEVTTTPPEETT 1074

  Fly   653 LDPAITEAPVTTQEPDVANINDGAPATEITTPAVEIVTAAAEVSDTAIPLIDPPVPQEIAVAEIP 717
            :...:|..|..:..|:     :.|..||:||...|..|...||  |.:|.....:|.|:      
Mouse  1075 IPTEVTTVPPASIPPE-----ETASLTEVTTTPPEETTTPTEV--TTVPPEKTTIPTEV------ 1126

  Fly   718 ETETKPAEVIVEQSTIPIEAPVPEVSKYAEPVISEAPAAEVPITAGDNPDNTSVGISEVVPTIAE 782
             |...||.:..|::|:|     ||.:..|.                   :.|:|...|......:
Mouse  1127 -TTVPPASIFPEETTVP-----PEETTIAS-------------------EETTVSTQETTLLTEQ 1166

  Fly   783 KAVEEVPTSEIPEQSSSPSDSVPVAKITPLLRDLQTTDVSLLAIAAT 829
            .||.:...:..|     |..|.|:..|.|||.  :...||:.::|.|
Mouse  1167 SAVTQTSIACRP-----PCPSPPLMPIGPLLS--KPPGVSMFSLAPT 1206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CpnNP_731674.1 rne <9..167 CDD:236766 51/204 (25%)
rne <109..300 CDD:236766 53/197 (27%)
rne <228..409 CDD:236766 48/183 (26%)
rne <331..594 CDD:236766 73/275 (27%)
rne <501..763 CDD:236766 63/262 (24%)
ZanNP_035871.2 MAM 47..210 CDD:279023
MAM 47..208 CDD:99706
MAM 217..374 CDD:279023
MAM 217..371 CDD:99706
MAM 379..542 CDD:279023 12/61 (20%)
MAM 379..540 CDD:99706 12/59 (20%)
mucin-like domain 572..1170 193/755 (26%)
DUF4758 729..899 CDD:292572 48/191 (25%)
TIL 1215..1264 CDD:280072
TILa 1266..1319 CDD:289484
VWD 1326..1478 CDD:278521
C8 1521..1596 CDD:214843
TIL 1599..1652 CDD:280072
TILa 1654..1708 CDD:289484
VWD 1715..1865 CDD:278521
C8 1911..1982 CDD:214843
TIL 1985..2039 CDD:280072
VWC 2041..2096 CDD:302663
VWD 2102..2260 CDD:278521
C8 2310..2380 CDD:285899
TIL 2384..2442 CDD:280072
TILa 2444..2498 CDD:289484
TIL 2504..2562 CDD:280072
TILa 2564..2618 CDD:289484
TIL 2624..2682 CDD:280072
TILa 2684..2738 CDD:289484
TIL 2744..2802 CDD:280072
TILa 2804..2858 CDD:289484
TIL 2864..2922 CDD:280072
TILa 2924..2978 CDD:289484
TIL 2984..3042 CDD:280072
TILa 3044..3098 CDD:289484
TIL 3104..3162 CDD:280072
TILa 3164..3218 CDD:289484
TIL 3224..3282 CDD:280072
TILa 3284..3338 CDD:289484
TIL 3344..3399 CDD:280072
TILa 3401..3455 CDD:289484
TIL 3461..3519 CDD:280072
TILa 3521..3575 CDD:289484
TIL 3581..3639 CDD:280072
TILa 3641..3695 CDD:289484
TILa 3761..3815 CDD:289484
TIL 3821..3879 CDD:280072
TILa 3881..3931 CDD:289484
TIL 3937..3995 CDD:280072
TILa 3997..4051 CDD:289484
TIL 4073..4131 CDD:280072
TILa 4133..4184 CDD:289484
TIL 4193..4251 CDD:280072
TILa 4253..4300 CDD:289484
TIL 4308..4366 CDD:280072
TILa 4368..4422 CDD:289484
TIL 4428..4486 CDD:280072
TILa 4488..4542 CDD:289484
TIL 4548..4606 CDD:280072
TILa 4608..4662 CDD:289484
TIL 4668..4726 CDD:280072
TILa 4728..4782 CDD:289484
TIL 4788..4846 CDD:280072
TILa 4848..4902 CDD:289484
VWD 4909..5062 CDD:278521
C8 5115..5191 CDD:214843
TIL 5194..5247 CDD:280072
VWC 5249..5302 CDD:302663
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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