DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cpn and K08D12.6

DIOPT Version :9

Sequence 1:NP_731674.1 Gene:Cpn / 41474 FlyBaseID:FBgn0261714 Length:864 Species:Drosophila melanogaster
Sequence 2:NP_741325.1 Gene:K08D12.6 / 176980 WormBaseID:WBGene00019540 Length:668 Species:Caenorhabditis elegans


Alignment Length:745 Identity:221/745 - (29%)
Similarity:264/745 - (35%) Gaps:222/745 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 AVAAPVQVVSPAA-----VAPAPAAPIAVTPVAPPPTLASVQPATVTIPAPAPIAAASVAPVASV 81
            |:|:...||...|     |.|||||.      ||.|..|.|:.|.|.:|||||  ||:.||....
 Worm    11 AIASSRYVVKRNAYGDEQVTPAPAAS------APAPADAPVEQAPVAVPAPAP--AAAPAPDCGS 67

  Fly    82 APPVVAAP-------------------TP-PAASPVSTPPVAVAQIPVAVSAPVAPPVAATPTPV 126
            |.|..|||                   || |||:..:.....|.|.||||.|| ||  ||.|.| 
 Worm    68 AAPAPAAPAATDSGYRSKRNAYGDEQVTPAPAAAAEAPADAPVEQAPVAVPAP-AP--AAAPAP- 128

  Fly   127 APIPVAAPVIATPPVAASAPTPAA------------VTPVVSPVIATPPVVPANTTVPVAAPVAA 179
             ....|||..|.|..||.|.|.:.            |||           .||....|..|||..
 Worm   129 -DCGSAAPAAAAPAAAAPAATDSGYRSKRNAYGDEQVTP-----------APAAAPAPADAPVEQ 181

  Fly   180 VPAAVPVVAPVLAPAVAPAVAPVVAETPAPPPVAEIPVATIPECVAPLIPEVSVVATKPLAAAEP 244
            .|.|||..||..|||                          |:|.:              ||..|
 Worm   182 APVAVPAPAPAAAPA--------------------------PDCGS--------------AAPAP 206

  Fly   245 VVVAPPATE---------------TPVVAPAAASPHVSVAPAVETAVVAPVSASTEPPVAAATL- 293
            ...||.||:               ||  |||||:|    |||......|||:.....||||..: 
 Worm   207 AAPAPAATDSGYRSKRNSYGDEQVTP--APAAAAP----APADAPVEQAPVAVPAPAPVAAPDVE 265

  Fly   294 --TTAPETPALAPVVAES--QVAANTVVATPPTPAPEPETIAPPVVAETP-EVASVAVAETTPPV 353
              :.||...|.||...:|  :...|:......||||    .|.|..|:.| |.|.|||....|..
 Worm   266 CGSAAPAPAAAAPAATDSGYRSKRNSYGDEQVTPAP----AAAPAPADAPVEQAPVAVPAPAPAA 326

  Fly   354 VP-PVAAESIPAPVVA-------------------TTPVPATLAVTDPDVTASAVPELPPVIAPS 398
            .| |....:.|||..|                   .||.||..|    :..|.|..|..||..|:
 Worm   327 APAPDCGSAAPAPAAAPAATDSGYRSKRNAYGDEQVTPAPAAAA----EAPADAPVEQAPVAVPA 387

  Fly   399 PVPSAVAETPVDLAPPVLPPVA------------AEPVPAVVAEETPETPAPASAPVTIAALDIP 451
            |.|:|........|.|......            ..|.||..||      |||.|||..|.:.:|
 Worm   388 PAPTAAPAPDCGSAAPAATDSGYRSKRNAYGDEQVTPAPAAAAE------APADAPVEQAPVAVP 446

  Fly   452 EVAPVIAAPSDAPAEAPSAAAPIVSTPPTTAS----------------VPETTAPPAAVPTE--P 498
            ..||..|...|..:.||:||||..:.|..|.|                .|.....||..|.|  |
 Worm   447 APAPAAAPAPDCGSAAPAAAAPAAAAPAATDSGYRSKRNAYGDEQVTPAPAAAPAPADAPVEQAP 511

  Fly   499 IDVSVLSEAAIETPVAPPVEVT-------------TEVAVADVAPPEAAADLIIE--PVEPPAPI 548
            :.|...:.||...|.||....|             .:|..|..|..||.||..:|  ||..|||.
 Worm   512 VAVPAPAPAAAPAPAAPAPAATDSGYRSKRNAYGDEQVTPAPAAAAEAPADAPVEQAPVAVPAPA 576

  Fly   549 PDLLEQTTSVPAVEAAESTSSP----IPETSLPPPNEAVASPEVAVAPITAPEPIPEP--EPSLA 607
            |      .:.||.:...:..:|    ..::.......|....:|..||..||.|...|  :..:|
 Worm   577 P------AAAPAPDCGSAAPAPAAPAATDSGYRSKRNAYGDEQVTPAPAAAPAPADAPVEQAPVA 635

  Fly   608 TPTEPIPVEAPVVIQEAVDAVEVPVTETST 637
            .|. |.|..||.  .:...|...|....:|
 Worm   636 VPA-PAPAAAPA--PDCGSAAPAPAAPAAT 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CpnNP_731674.1 rne <9..167 CDD:236766 63/181 (35%)
rne <109..300 CDD:236766 67/220 (30%)
rne <228..409 CDD:236766 66/221 (30%)
rne <331..594 CDD:236766 92/332 (28%)
rne <501..763 CDD:236766 41/158 (26%)
K08D12.6NP_741325.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.