DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpn and Y8A9A.2

DIOPT Version :9

Sequence 1:NP_731674.1 Gene:Cpn / 41474 FlyBaseID:FBgn0261714 Length:864 Species:Drosophila melanogaster
Sequence 2:NP_001364778.1 Gene:Y8A9A.2 / 173723 WormBaseID:WBGene00021171 Length:1358 Species:Caenorhabditis elegans


Alignment Length:429 Identity:89/429 - (20%)
Similarity:137/429 - (31%) Gaps:58/429 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   284 TEPPVAAATLTTAPETPALAPVVAESQVAANTVVATPPTPAPEPETIAPPVVAETPEVASVAVAE 348
            |:.||...|.||:..|...|....||...:.....|..|.....|:.:....:.|.|..:.:..|
 Worm   175 TDIPVTTTTSTTSSTTTTTATSTTESTSTSTDSTTTESTTESTTESTSTSTDSTTTESTTESTTE 239

  Fly   349 TTPPVVPPVAAESIPAPVVATTPVPATLAVTDPDVTA--SAVPELPPVIAPSPVPSAVAETPVDL 411
            :|.........||......:||....|.:.|:...|:  |...|.......|....:..|:..: 
 Worm   240 STSTSTDSTTTESTSTSTDSTTTESTTESTTESTSTSTDSTTTESTSTSTDSTTTESTTESTTE- 303

  Fly   412 APPVLPPVAAEPVPAVVAEETPETPAPASAPVTIAALDIPEVAPVIAAPSDAPAEAPSAAAPIVS 476
                   ..:....:...|.|.|:...:::..|                .....|:.|.:....:
 Worm   304 -------STSTSTESTTTESTTESTTESTSTST----------------DSTTTESTSTSTDSTT 345

  Fly   477 TPPTTASVPETTAPPAAVPTEPIDVSVLSEAAIETPVAPPVEVTTE--VAVADVAPPEAAADLII 539
            |..||.|..|:|    :..|:.......|.:...|......|.|||  ....|....|:..:...
 Worm   346 TESTTESTTEST----STSTDSTTTESTSTSTDSTTTESTTESTTESTSTSTDSTTTESTTESTT 406

  Fly   540 EPVEPPAPIPDLLEQTTSVPAVEA-AESTSSPIPETSLPPPNEAVASPEVAVAPITAPEPIPE-P 602
            |......      :.||:....|: .||||:....|:.....|:...........|..|...| .
 Worm   407 ESTSTST------DSTTTESTTESTTESTSTSTDSTTTESTTESTTESTSTSTDSTTTESTTEST 465

  Fly   603 EPSLATPTEPIPVEAPVVIQEAVDAVEVPVTETSTSIPETTVEYPVAEKVLDPAITEAPVTTQE- 666
            ..|.:|.|:....|:         ..|.....||||...||.| ...|...:...|....||.| 
 Worm   466 TESTSTSTDSTTTES---------TTESTTESTSTSTDSTTTE-STTESTTESTSTSTDSTTTES 520

  Fly   667 ----PDVANINDGAPATEITTPAVEIVTAAAEVSDTAIP 701
                .|.......:.:|:.||  .|:.|.|:: |.|.:|
 Worm   521 TSTSTDSTTTESTSTSTDSTT--TEVTTTASD-SSTTVP 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CpnNP_731674.1 rne <9..167 CDD:236766
rne <109..300 CDD:236766 6/15 (40%)
rne <228..409 CDD:236766 28/126 (22%)
rne <331..594 CDD:236766 46/267 (17%)
rne <501..763 CDD:236766 48/210 (23%)
Y8A9A.2NP_001364778.1 TSP1 1203..1252 CDD:214559
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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