DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpn and COCH

DIOPT Version :9

Sequence 1:NP_731674.1 Gene:Cpn / 41474 FlyBaseID:FBgn0261714 Length:864 Species:Drosophila melanogaster
Sequence 2:NP_001334649.1 Gene:COCH / 1690 HGNCID:2180 Length:615 Species:Homo sapiens


Alignment Length:89 Identity:26/89 - (29%)
Similarity:32/89 - (35%) Gaps:22/89 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   399 PVPSAVAETPVDLAPPVLPPVAAEPVPAVVAEETPETPAP--------ASAPVTIA----ALDIP 451
            |.|.|.|..|.:....|.||..|   ||:       |||.        :.||:.|.    .|||.
Human    53 PAPWASALPPEEEGAKVEPPRGA---PAL-------TPAADLLLLTCFSHAPIAITCFTRGLDIR 107

  Fly   452 EVAPVIAAPSDAPAEAPSAAAPIV 475
            :....:..|...|.|..|....||
Human   108 KEKADVLCPGGCPLEEFSVYGNIV 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CpnNP_731674.1 rne <9..167 CDD:236766
rne <109..300 CDD:236766
rne <228..409 CDD:236766 4/9 (44%)
rne <331..594 CDD:236766 26/89 (29%)
rne <501..763 CDD:236766
COCHNP_001334649.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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