DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cpn and Fcgbp

DIOPT Version :9

Sequence 1:NP_731674.1 Gene:Cpn / 41474 FlyBaseID:FBgn0261714 Length:864 Species:Drosophila melanogaster
Sequence 2:NP_001158129.3 Gene:Fcgbp / 100303643 RGDID:2313189 Length:2583 Species:Rattus norvegicus


Alignment Length:300 Identity:57/300 - (19%)
Similarity:83/300 - (27%) Gaps:108/300 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   570 PIPETSLPPPNEAVASPEVAVAPITAPEPIPEPEPSLATPTEPI--------------------- 613
            |.|:...|...|....|: |...|||||....|..||..||:..                     
  Rat  1827 PCPQPCTPEQQEPFRGPD-ACGIITAPEGPLAPCHSLVPPTKYFEACLLDACQVQGHPGGLCPAI 1890

  Fly   614 -----------------------PVEAPVVIQEAVDAVEVPVTETSTSIP---ETTVE------- 645
                                   |::.|......:.....||:..|.|.|   |||..       
  Rat  1891 ATYVAACQAAGAQLGEWRKPDFCPLQCPANSHYQLCGDSCPVSCPSLSAPEGCETTCREGCVCDS 1955

  Fly   646 ---------YPVAE---------KVLDPAITEAP-------------VTTQEP------DVANIN 673
                     .||.:         .||.......|             ||.||.      :...:.
  Rat  1956 GFVLSGDTCVPVGQCGCLYNGRYYVLGATFYPGPECERLCECGPGGQVTCQEGADCEPYEECRVE 2020

  Fly   674 DGAPATE-------ITTPAVEIVTAAAEVSDT------AIPLIDPPVP--QEIAVAEIPETETKP 723
            :|..|..       :....|..||....|.|.      .:..:..|.|  :|.::....::..:|
  Rat  2021 NGVQACHPTGCGHCLANGGVHYVTLDGRVYDLHGSCSYVLAGVCRPKPGEEEFSIVLEKDSAGEP 2085

  Fly   724 AEVIVE-QSTIPIEAPVPEVSKYAEPVISEAPAAEVPITA 762
            ..|:|. ...:.:.|..|:|:...|.|......|.|.:||
  Rat  2086 QRVVVTVADQVVVLARGPQVTVDGEAVALPVATAHVSVTA 2125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CpnNP_731674.1 rne <9..167 CDD:236766
rne <109..300 CDD:236766
rne <228..409 CDD:236766
rne <331..594 CDD:236766 6/23 (26%)
rne <501..763 CDD:236766 56/299 (19%)
FcgbpNP_001158129.3 VWD 56..210 CDD:395046
C8 251..326 CDD:214843
TIL 329..383 CDD:396409
VWD 448..603 CDD:395046
C8 642..717 CDD:214843
TIL 720..773 CDD:396409
VWC 775..829 CDD:327433
VWD 836..991 CDD:395046
C8 1034..1109 CDD:214843
TIL 1112..1165 CDD:396409
VWC 1167..1219 CDD:327433
VWD 1253..1412 CDD:395046
C8 1451..1526 CDD:214843
TIL 1530..1584 CDD:410995
VWD 1652..1808 CDD:395046
C8 1840..1914 CDD:214843 12/74 (16%)
TIL 1917..1970 CDD:396409 11/52 (21%)
VWD 2024..2180 CDD:214566 20/101 (20%)
C8 2222..2296 CDD:214843
TIL 2299..2352 CDD:396409
VWC 2357..2407 CDD:327433
VWD 2406..2560 CDD:413350
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.