DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpn and muc5.1

DIOPT Version :9

Sequence 1:NP_731674.1 Gene:Cpn / 41474 FlyBaseID:FBgn0261714 Length:864 Species:Drosophila melanogaster
Sequence 2:XP_021326297.1 Gene:muc5.1 / 100148804 ZFINID:ZDB-GENE-120822-1 Length:5282 Species:Danio rerio


Alignment Length:903 Identity:211/903 - (23%)
Similarity:298/903 - (33%) Gaps:194/903 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SAPVAAPVTPSAVAAPVQVVSPAAVAPAPAAPIAVTPVAPPPTLASVQPATVTIPAPAPIAAASV 75
            |.|..:..|||...:.....:..:...:...|..:|....|.|..|...:|.|     ||...| 
Zfish  3654 STPSTSTETPSTTTSTTSPTTETSTPTSTETPSTITSTVTPTTGTSTPTSTET-----PITTTS- 3712

  Fly    76 APVASVAPPVVAAPTPPAASPVSTPPVAVAQIPVAVSAPVAPPV-AATPTPV-APIPVAAPVIAT 138
                      :.:||...::|.||      :.|...::..:|.. .||||.. .|..:.:.|  |
Zfish  3713 ----------ITSPTTETSTPTST------ETPSTTASTTSPTTETATPTSTETPSTITSTV--T 3759

  Fly   139 PPVAASAPTPAAVTPVVSPVIATPPVVPANTTVPVAAPVAAVPAAVPVVAPVLAPAVAPAVAPVV 203
            |....|.||.....|..|...||  ..|.:||.|:..|.......:        .:..|...|..
Zfish  3760 PTTETSTPTSTETVPTPSTTTAT--TTPTSTTTPICVPKCEWSDWI--------DSNKPNTEPEG 3814

  Fly   204 AETPAPPPVAEIPVATIP-----ECVAPLIP---------------------------------- 229
            .||.:.|.:......|..     ||.|...|                                  
Zfish  3815 FETESIPLLWNSKRITCQSPEEVECRAVNYPQKTLEDLGQTVYCNTSFGLSCSNEDNAEGLPPIC 3879

  Fly   230 ---EVSVVATKPLAAAEPVVVAP-PATETPVVAPAAASPHVSVAPAVETAVVAPVSASTEPPVAA 290
               |:.|...|....::.....| .:||||....:..|      |..||:    ...|||.| :.
Zfish  3880 YNYEIRVYCCKYNCPSDTTTSTPYTSTETPSTTASTTS------PTTETS----TPTSTETP-ST 3933

  Fly   291 ATLTTAPETPALAPVVAESQVAANTVVATPPTPAPEPETIAPPVVAETPEVASVAVAETTPPVVP 355
            .|.|..|.|..|.|...|      |...|..|.:|..|| :.|...|||...:..|..||....|
Zfish  3934 ITSTVTPTTGTLTPTSTE------TPSTTASTTSPTIET-STPTSTETPSTITSTVTPTTGTSTP 3991

  Fly   356 -----PVAAESIPAPVVAT-----TPVPATLAVTDPDVTASAVP---ELPPVIAPSPVPSAVAET 407
                 |:...||.:|...|     |..|:|.|.|....|.:..|   |.|..|..:..|:....|
Zfish  3992 TSTETPITTTSITSPTTETSTPTSTETPSTTASTTSPTTETPTPTSTETPSTITSTITPTTGTST 4056

  Fly   408 PVDLAPPVLPPVAAEPVPAVVAEETPETPAPAS--APVTIAALDIPEVAPVIAAPSDAPAEAPSA 470
            |.....|:.......|        |.||..|.|  .|.|.|:...|.........::.|:...|.
Zfish  4057 PTSTETPITTTSITSP--------TTETSTPTSTETPSTTASTTSPTTETATPTSTETPSTITST 4113

  Fly   471 AAPIVST-PPTTASVPETTAPPAAVPTEPIDVSVLSEAAIETP------VAP------PVEVTTE 522
            ..|...| .||:...|.|||...:..||     .|:..:.|||      |.|      |....|.
Zfish  4114 VTPTTGTLTPTSTETPSTTASTTSPTTE-----TLTPTSTETPSTITSTVTPTTGTSTPTSTETP 4173

  Fly   523 VAVADVAPPEAAADLIIEPVEPPAPIPDLLEQTTSVPAVEAAESTSSPIPETSLPPPNEAVASPE 587
            :....:..|         ..|...|      .:|..|:..|  ||:||..|||.|...|   :|.
Zfish  4174 ITTTSITSP---------TTETSTP------TSTETPSTTA--STTSPTTETSTPTSTE---TPS 4218

  Fly   588 VAVAPITAPEPIPEPEPSLATPTEPIPVEAPVVIQEAVDAVEVPVTETSTSIPETTVEYPVAEKV 652
            ...:.||.......| .|..||:......:|........:.|.|.|..||:.|.|.:..|.:.:.
Zfish  4219 TITSTITPTTGTSTP-TSTETPSTTASTTSPTTETSTPTSTETPSTTASTTSPTTEISTPTSTET 4282

  Fly   653 LDPAI----------TEAPVTTQEPDVANINDGAPATEITTPA--------VEIVTAAAEVS--- 696
              |::          |.||.:|:.|.... :..:|.||.:||.        ...||...|.|   
Zfish  4283 --PSLGTSTVTPTTGTSAPTSTETPSTTT-SITSPTTETSTPTSTETPSTITSTVTPTTETSTPT 4344

  Fly   697 -----DTAIPLIDPPVPQEIAVAEIPETETKPAEVIVEQSTIPIEAPVPEVSKYAEPVISEAPAA 756
                 .|.||:...|......|..:....|:.....|..:|||.|.|...|:  ...:.:|.|:.
Zfish  4345 STETTSTTIPVTTIPTETPSTVVTVTTLSTETPSTTVSVTTIPTETPSTIVT--VTTISTETPST 4407

  Fly   757 EVPIT--AGDNPDN--TSVGISEVVPTIAEKAVEEVPTSEIPEQSSSPSDSVPVAKIT 810
            .|.:|  :..:|..  |:...|...|:|...:...:.|.:....|.|.:.|.....:|
Zfish  4408 TVTVTPISTKSPSTIVTATPKSTKTPSITIGSTTTMSTEKPSTSSKSTTTSTSTKPVT 4465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CpnNP_731674.1 rne <9..167 CDD:236766 37/157 (24%)
rne <109..300 CDD:236766 50/235 (21%)
rne <228..409 CDD:236766 55/231 (24%)
rne <331..594 CDD:236766 73/290 (25%)
rne <501..763 CDD:236766 71/301 (24%)
muc5.1XP_021326297.1 VWD 72..217 CDD:214566
C8 263..320 CDD:312319
TIL 324..380 CDD:307783
VWD 420..571 CDD:306577
C8 606..680 CDD:214843
Pacifastin_I 848..>874 CDD:253170
VWD 867..1025 CDD:214566
C8 1063..1135 CDD:214843
Mucin2_WxxW 1386..1476 CDD:315900
Mucin2_WxxW 1631..1721 CDD:315900
Mucin2_WxxW 1895..1985 CDD:315900
Mucin2_WxxW 2141..2231 CDD:315900
Mucin2_WxxW 2366..2456 CDD:315900
Mucin2_WxxW 2612..2702 CDD:315900
Mucin2_WxxW 2814..2904 CDD:315900
Mucin2_WxxW 3060..3150 CDD:315900
Mucin2_WxxW 3306..3396 CDD:315900
Mucin2_WxxW 3552..3642 CDD:315900
Mucin2_WxxW 3798..3888 CDD:315900 12/97 (12%)
VWD 4616..4779 CDD:214566
C8 4818..4880 CDD:312319
CT 5198..5274 CDD:214482
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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