DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpn and si:ch73-366l1.5

DIOPT Version :9

Sequence 1:NP_731674.1 Gene:Cpn / 41474 FlyBaseID:FBgn0261714 Length:864 Species:Drosophila melanogaster
Sequence 2:XP_005168544.1 Gene:si:ch73-366l1.5 / 100003714 ZFINID:ZDB-GENE-131127-426 Length:469 Species:Danio rerio


Alignment Length:610 Identity:153/610 - (25%)
Similarity:206/610 - (33%) Gaps:214/610 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 VAQIPVAVSAPVAPPVAATPTPVAPIPVAAPVIATPPVAASAP---TPAAVTPVVSPVIATPPVV 165
            :..:||.:||.....:|        |.:|:.::|..|.....|   ....:|.:..|.       
Zfish     2 IIDVPVILSALFFTVIA--------IIIASTLLAKKPAPKKEPKEKRDERLTELQQPA------- 51

  Fly   166 PANTTVPVAAPVAAVPAAVPVVAPVLAPAVAPAVAPVVAET------PAPPPVAEIPVATIPECV 224
             ....||..|.....|....:::||.|.....|||||:.:.      |....|...||...||  
Zfish    52 -EEQHVPATALRREDPCHAELISPVQAEEPVSAVAPVIEDVGVLEDQPESIAVQHTPVQATPE-- 113

  Fly   225 APLIPEVSVVATKPLAAAEPVVVAPPATETPVVAPAAASPHVSVAPAVETAVVAPVSASTEPPVA 289
                ||     .||....|.||.:.|..|...|......|..:..|.            ..|.:.
Zfish   114 ----PE-----PKPEPVPEAVVESAPVEELKSVPEPVTEPEPTKKPV------------PAPEIV 157

  Fly   290 AATLTTAPETPALAPVVAESQVAANTVVATP---PTPAPEP--ETIAPPVVAETPEVASVAVAET 349
            ..|: :||| |..|||.|...|..:..|..|   |..||||  |::..|...|.|..|...|.|.
Zfish   158 QETI-SAPE-PVKAPVPAPKSVEESVHVTEPVKAPVQAPEPVKESVPAPEPVEEPVQAPEPVKEP 220

  Fly   350 TPPVVPPVAAESIPAPVVATTPVPATLAVTDPDVTASAVPELPPVIAPSPVPSAVAETPVDLAPP 414
            .|  .|.:..|.:|||......|||      |:....:||.|.||..|.|.|..|.|:...|||.
Zfish   221 VP--APELVKEPVPAPEPVKESVPA------PETVKESVPVLAPVKEPVPAPETVKESVPVLAPV 277

  Fly   415 VLPPVAAEPVPAVVAEETPETPAPASAPVTIAALDIPEVAPVIAAPSDAPAEAPSAAAPIVSTPP 479
            ..|..|:||||..|.|..|                :|::.|                      .|
Zfish   278 KEPVPASEPVPKPVKESVP----------------VPDLVP----------------------EP 304

  Fly   480 TTASVPETTAPPAAVPTEPIDVSVLSEAAIETPVAPPVEVTTEVAVADVAPPEAAADL-IIEPVE 543
            ...|:||      .|| ||:..||.:..|::..|..||             ||...|: |.|||.
Zfish   305 VKESIPE------PVP-EPVKESVPASEAVKESVQEPV-------------PERVQDVPIPEPVS 349

  Fly   544 PPAPIPDLLEQTTSVPAVEAAESTSSPIPETSLPPPNEAVASPEVAVAPITAPEPIPEPEPSLAT 608
            .|:|.|                   :|:|                  ||:|.|||:..|||    
Zfish   350 VPSPEP-------------------APVP------------------APVTEPEPVSTPEP---- 373

  Fly   609 PTEPIPVEAPVVIQEAVDAVEVPVTETSTSIPETTVEYPVAEKVLDPAITEAPVTTQEPDVANIN 673
                               :.||.|| :.|:||::.                      |:|...|
Zfish   374 -------------------LSVPATE-AESVPESSA----------------------PEVFENN 396

  Fly   674 DGAPATEITTPAVEIVTAAAEVSDT 698
            |.|.|         :.:..||::||
Zfish   397 DVASA---------VASDEAELADT 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CpnNP_731674.1 rne <9..167 CDD:236766 12/65 (18%)
rne <109..300 CDD:236766 46/199 (23%)
rne <228..409 CDD:236766 57/185 (31%)
rne <331..594 CDD:236766 68/263 (26%)
rne <501..763 CDD:236766 44/199 (22%)
si:ch73-366l1.5XP_005168544.1 KH-I 316..424 CDD:294072 45/202 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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