DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr15 and Cadm3

DIOPT Version :9

Sequence 1:NP_001287299.1 Gene:dpr15 / 41473 FlyBaseID:FBgn0037993 Length:662 Species:Drosophila melanogaster
Sequence 2:XP_006497123.3 Gene:Cadm3 / 94332 MGIID:2137858 Length:547 Species:Mus musculus


Alignment Length:556 Identity:113/556 - (20%)
Similarity:179/556 - (32%) Gaps:171/556 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 ASIAPN---GTAFGDAPSIPI------GVAPATTT----------TIDPATTTPTTTTRRTT--R 179
            ||..|.   |:|.|...::|:      ..||....          .::..|..|......:|  .
Mouse   106 ASAQPGRWPGSAMGAPSALPLLLLLACSWAPGGANLSQDGYWQEQDLELGTPAPLEEALSSTVWS 170

  Fly   180 RPVATTTLKPPPTIDDYQTIISQAGTHAYLPCNVKQLVKKPISWLRMRDGHILTVDQTTF----- 239
            .|....:....|...| :|::  ||....|.|.||......:.|..       ...||.:     
Mouse   171 NPDLLASQDSQPWTSD-ETVV--AGGTVVLKCQVKDHEDSSLQWSN-------PAQQTLYFGEKR 225

  Fly   240 -IADQRFQSVFSPNPERWSLQIKYVQLKDEGTYECQVSTEP--KASAIVHLRIVEPKTELIG--E 299
             :.|.|.|.| |..|...|:.|..|.|.|||.|.|.:.|.|  .|.::|.:..:..|..:.|  .
Mouse   226 ALRDNRIQLV-SSTPHELSISISNVALADEGEYTCSIFTMPVRTAKSLVTVLGIPQKPIITGYKS 289

  Fly   300 STRHVKAGSQVKLRCIISQALEPPLFINWFYNQKQIYLHNRRGWRTEIERIDLPAEVPTTSTTTT 364
            |.|..:..:   |.| .|...:|...:.|....::::     |.:|.|:      |.|...|.|.
Mouse   290 SLREKETAT---LNC-QSSGSKPAAQLTWRKGDQELH-----GDQTRIQ------EDPNGKTFTV 339

  Fly   365 TTTTTASTTTTTTSTTPATPSTTATGSTEGA-----TSSETLNGLVTITRSYILDAISQNDVSEL 424
            :::.                |...|...:||     .:.|:|.|                     
Mouse   340 SSSV----------------SFQVTREDDGANIVCSVNHESLKG--------------------- 367

  Fly   425 GAAAGVAVATETSTAQLLTEVEATSSTSGTSTGAGLLASTSAAYAAGAAAGITTAATGDSAATAA 489
                     .:.||:|.: ||        ..|...::....|....|....:.....|:   ...
Mouse   368 ---------ADRSTSQRI-EV--------LYTPTAMIRPEPAHPREGQKLLLHCEGRGN---PVP 411

  Fly   490 TTSAWLTTMDAEAATTAATTTTTMLPSSSFIKQITTASLIIPAVVKLDSGNYTCSPSNSAPRTIV 554
            ....|:..                 .|...:|....::||.|.:.|.|||.|.|:.:::.     
Mouse   412 QQYVWVKE-----------------GSEPPLKMTQESALIFPFLNKSDSGTYGCTATSNM----- 454

  Fly   555 LHVLNGEYSA---------SAIKSGSVSWSALIGCHGYLHWRNVSTLLTLLWIIKFALARDICQP 610
                 |.|:|         |.:.|.|.::.|:||  |.     |:.::.||.|:...|...:.: 
Mouse   455 -----GSYTAYFTLNVNDPSPVPSSSSTYHAIIG--GI-----VAFIVFLLLILLIFLGHYLIR- 506

  Fly   611 NATSKATTRTSLLRAGDGA----TADVTRETGPKSG 642
               .|.|..|...:..|.|    ||.:..|.|...|
Mouse   507 ---HKGTYLTHEAKGSDDAPDADTAIINAEGGQSGG 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr15NP_001287299.1 IG_like 197..289 CDD:214653 29/99 (29%)
V-set 204..290 CDD:284989 27/93 (29%)
Cadm3XP_006497123.3 Ig1_Necl-1 181..275 CDD:143290 31/104 (30%)
Ig2_Necl-1 296..378 CDD:143329 22/143 (15%)
IG 388..465 CDD:214652 18/106 (17%)
4.1m 503..518 CDD:128590 3/18 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I12439
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I5205
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.050

Return to query results.
Submit another query.