DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr15 and hmcn2

DIOPT Version :9

Sequence 1:NP_001287299.1 Gene:dpr15 / 41473 FlyBaseID:FBgn0037993 Length:662 Species:Drosophila melanogaster
Sequence 2:XP_001920501.5 Gene:hmcn2 / 565032 ZFINID:ZDB-GENE-030131-9765 Length:4212 Species:Danio rerio


Alignment Length:510 Identity:103/510 - (20%)
Similarity:171/510 - (33%) Gaps:145/510 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 TTLKPPPTIDDYQTIISQAGTHAYLPCNVKQLVKKPISWLR------MRDGHILTVDQTTFIADQ 243
            |..:|||.:.....:.|..||.|.|.|.::..|:..::|.|      .|.|.:..:..:      
Zfish   511 TVREPPPVLRPPVNVTSSPGTVAVLSCQIQGSVRHNLTWYRTGSALPSRSGRVRVLANS------ 569

  Fly   244 RFQSVFSPNPERWSLQIKYVQLKDEGTYECQVS-TEPKASAIVHLRIVEPKTELIGESTRHVKAG 307
                         ||:|.:|:.:|.|.|:|:.| ...::.|:|.|.::|..:.::...|:....|
Zfish   570 -------------SLEISWVRSQDAGPYQCRASNAHGESQAVVWLVVLEAPSVVVSPQTQSFSLG 621

  Fly   308 SQVKLRCIISQALEPPLFINWFYNQKQIYLHN-RRGWRTEIERIDLPAEVPTTSTTTTTTTT--- 368
            ::|.:.|..|.:..|.:|  |.:.  .|:|.| .|...:|...:.:....|..|...|...|   
Zfish   622 AEVHISCSASGSPPPKVF--WSHG--NIFLSNHHRMSISESGMLTIRGAAPEDSGNYTCLATNEV 682

  Fly   369 -TASTTTTTTSTTPATPSTTATGSTEGATSSETLNGLVTITRSYILDAISQNDVSELGAAAGVAV 432
             |||.:.......|.:.|.........|....:|....:.|.|.|:.  .|....:||.|.....
Zfish   683 GTASQSVNVNYAEPPSISVVQQMVMVVAGEDASLECQASGTPSPIVK--WQKGDLDLGTAPFAEQ 745

  Fly   433 ATETSTAQLLTEVEATSSTSGTSTGAGLLASTSAAYAAGAAAGIT--------TAATGD------ 483
            .....|.| :..|:...|...|...:.:..|:||.......|..|        ||:.||      
Zfish   746 DVHRGTLQ-IRGVQELDSGDYTCVASNIAGSSSAVVVLQVGAAPTFSESPVDITASVGDNITLPC 809

  Fly   484 -----------------------SAATAATT----------SAW--------------------- 494
                                   |:....|:          |.|                     
Zfish   810 IARGFPTPSLIWRRQDGRPIFGKSSGHVGTSQLPSGALQIQSVWVDDEGVYLCEAKNQFGSIKAL 874

  Fly   495 ----LTTMDAEAATTAATTTTTM----------------LPSSSFI---KQI---------TTAS 527
                :|.::.......|.:.|||                ||...:.   ||:         :..|
Zfish   875 ARVTVTGLEPPLLVQGAPSITTMIAQPLNLPCRLLDGIPLPERIWTHNGKQVRVGGRVFLRSDGS 939

  Fly   528 LIIPAVVKLDSGNYTCSPSN---SAPRTIVLHVLNGEYSASAIKSGSVSWSALIG 579
            |.:...|..|:|.|.|:..|   ||..|:.:.|    ::...||:|.:.::|..|
Zfish   940 LHVDRAVPEDAGTYVCTAVNVAGSANITVTVEV----HAPPDIKAGPLHYTASEG 990

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
dpr15NP_001287299.1 IG_like 197..289 CDD:214653 23/98 (23%)
V-set 204..290 CDD:284989 22/92 (24%)
hmcn2XP_001920501.5 VWA_2 38..208 CDD:290253