DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr15 and paplna

DIOPT Version :9

Sequence 1:NP_001287299.1 Gene:dpr15 / 41473 FlyBaseID:FBgn0037993 Length:662 Species:Drosophila melanogaster
Sequence 2:XP_005169942.1 Gene:paplna / 562930 ZFINID:ZDB-GENE-070815-4 Length:1187 Species:Danio rerio


Alignment Length:430 Identity:82/430 - (19%)
Similarity:128/430 - (29%) Gaps:148/430 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 SWLRMRD-GHILTVD----------QTTFIADQRFQSVFSP--------NP-ERWSLQIKYVQLK 266
            |.||.|| .|:|::.          |.:.....|.|....|        || ..|:.:...:...
Zfish   773 SELRQRDQAHVLSLQHGRRRFPAHVQLSSSGAHRAQRAHQPASNAMQQSNPAASWTAEGVSIDKT 837

  Fly   267 DEGTYE----------CQVSTEPKASAIVHLR----IVEPKTELIGESTRHVKAGSQVKLRCIIS 317
            |..|.|          |:|:..|.::.:|..|    .|:|        |||             .
Zfish   838 DPSTVEGLVGQRVVLPCRVTPPPSSAVLVEWRRDGVPVDP--------TRH-------------E 881

  Fly   318 QALEPPLFI--------NWFY---------NQKQIYLHNRRGWRTEIERIDLPAEVPTTSTTTTT 365
            |.|:..|.:        .||.         :.:.|||                            
Zfish   882 QQLDGSLLVGPITLQDSGWFLCVATRDDKRDHRYIYL---------------------------- 918

  Fly   366 TTTTASTTTTTTSTTPATPSTTATGSTEGATSSETLNGLVTITRSYILDA----ISQNDVSELGA 426
            :.:.:|......|...::.|.|:..|:.           ..|..|.:::|    .::...|.|..
Zfish   919 SVSGSSQNNAGISEVDSSQSYTSQSSSR-----------FNIDYSPLVEARAGQTAKLQCSVLPV 972

  Fly   427 AAGVAVATETSTA-QLLTEVEATSSTSGTSTGAGLLASTSAAYAAGAAAG-------ITTAATGD 483
            :|..||....|.| |.|..:..:..:.||.....|.|..|..|.......       :.....||
Zfish   973 SAIHAVTIHWSRAGQPLNSLRHSQHSDGTLVIKQLTADDSGLYTCTVTDAQKFEERQVQLRVLGD 1037

  Fly   484 SAATAATTSAWLTTMDAEAATTAATTT------------TTMLPSSSFIKQITTASLIIPAVVKL 536
            ...|.|...  :..:....|..|...|            ..:.|....:......:||:..|..:
Zfish  1038 LRITKAPID--VDVVQGSTAQLACVVTGENVNVGWSRNGVPVRPDGHRVHVSADGTLILNNVQSV 1100

  Fly   537 DSGNYTCSP-----SNSAPRTIVL------HVLNGEYSAS 565
            |.|.|||:.     |.||...|.|      .:..|::|:|
Zfish  1101 DEGTYTCNAYTGTLSVSAAAEIRLAKTPQQDIDGGQFSSS 1140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr15NP_001287299.1 IG_like 197..289 CDD:214653 22/100 (22%)
V-set 204..290 CDD:284989 22/101 (22%)
paplnaXP_005169942.1 TSP1 24..75 CDD:214559
ADAM_spacer1 181..293 CDD:310520
TSP1 303..356 CDD:214559
TSP1 388..442 CDD:214559
TSP1 449..498 CDD:214559
TSP1 504..557 CDD:214559
KU 720..771 CDD:238057
Ig_3 839..906 CDD:316449 17/87 (20%)
IGc2 960..1022 CDD:197706 15/61 (25%)
I-set 1039..1121 CDD:333254 17/83 (20%)
PLAC 1142..1173 CDD:312271
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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