DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr15 and Hmcn1

DIOPT Version :9

Sequence 1:NP_001287299.1 Gene:dpr15 / 41473 FlyBaseID:FBgn0037993 Length:662 Species:Drosophila melanogaster
Sequence 2:XP_006529820.1 Gene:Hmcn1 / 545370 MGIID:2685047 Length:5658 Species:Mus musculus


Alignment Length:517 Identity:111/517 - (21%)
Similarity:172/517 - (33%) Gaps:148/517 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 KPPPTIDDYQTIISQAGTHAYLPCNVKQLVKKPISWLRMRDGHILTVDQTTFIADQ-RFQSVFSP 251
            :|||.|.....:....|..|.|.|.|...|...::|  .|.|..:.      :||. |.:::   
Mouse   518 EPPPIIQLPNNVTVTPGERAVLACLVISAVDYNLTW--QRSGRDIR------LADSARIRTL--- 571

  Fly   252 NPERWSLQIKYVQLKDEGTYECQVSTE-PKASAIVHLRIVEPKTELIGESTRHVKAGSQVKLRCI 315
              ...||:::.|::.|.|.|.|.||:| ..|:|.|.|.:.|.....:....:....||::.:.|.
Mouse   572 --ANLSLELRSVKIGDAGEYRCVVSSEGGSAAASVFLTVQEKPKVTVMPKNQSFTGGSEISIMCS 634

  Fly   316 ISQALEPPLFINWFYNQKQIYLHNRRGWRTEIERIDLPAEVPTTSTTTTTTTTTASTTTTTTST- 379
            .:...:|.  |.|..|:..| :.:.|...|....:.:...||..:.|.....:.|:.|...||| 
Mouse   635 ATGYPKPK--IVWTMNEMFI-MGSHRYRMTSEGTLFIKNAVPKDAGTYACLASNAAGTDKQTSTL 696

  Fly   380 ---------TPATPSTTATGST---EGATSS-----------------------ETLNGLVTITR 409
                     ...:....|.|.|   |..||.                       :.|.||:.|..
Mouse   697 RYIEAPKLVVEQSELLVALGDTTVMECKTSGIPPPQVKWFKGDLELRPSTFLSIDPLVGLLKIQE 761

  Fly   410 SYILDAISQND-----VSELGAAAG------------------VAVATETSTA------------ 439
            :..|||   .|     ::|.|.|.|                  |||...::..            
Mouse   762 TQDLDA---GDYTCVAINEAGRATGRLTLDVGSPPVFIQEPSDVAVEIGSNVTLPCYVQGYPEPK 823

  Fly   440 ---------QLLTEVEATSSTSGTSTGA----GLLASTSAAYAAGA-------AAGITTAATGDS 484
                     .:.:...:.|..|...|||    .|.||....|...|       .:..|...||..
Mouse   824 IKWRRLDNMPVFSRPFSVSFISQLRTGALFISNLWASDKGTYICEAENQFGKIQSQTTVTVTGLV 888

  Fly   485 AATAATTSAWLTTMDAEAATTAAT-------------TTTTMLPSSSFIKQITTASLIIPAVVKL 536
            |.....:.:..:.::.:..|...|             ..:.||..:.:|...:..||.|..|...
Mouse   889 APLIGISPSMASVIEGQPLTLPCTLLAGNPIPERRWMKNSAMLVQNPYITVRSDGSLHIERVRLQ 953

  Fly   537 DSGNYTCSPSNSA-----PRTIVLHVL----NGEY--------------SASAIKSGSVSWS 575
            |.|.|||..||.|     ..::.:|||    :|:.              .||.|...|::||
Mouse   954 DGGKYTCVASNVAGTNNKTTSVAVHVLPSIQHGQQILSTIEGVPVTLPCRASGIPKPSITWS 1015

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr15NP_001287299.1 IG_like 197..289 CDD:214653 26/93 (28%)
V-set 204..290 CDD:284989 26/87 (30%)
Hmcn1XP_006529820.1 vWFA 42..198 CDD:238119
Ig 520..608 CDD:386229 29/100 (29%)
Ig 612..696 CDD:386229 17/86 (20%)
I-set 702..789 CDD:369462 18/89 (20%)
I-set 793..884 CDD:369462 14/90 (16%)
Ig 890..977 CDD:386229 17/86 (20%)
Ig 980..1071 CDD:386229 8/36 (22%)
I-set 1085..1167 CDD:369462
I-set 1171..1257 CDD:369462
Ig 1266..1354 CDD:386229
I-set 1368..1447 CDD:369462
IG_like 1459..1541 CDD:214653
Ig 1564..1632 CDD:386229
I-set 1644..1728 CDD:369462
I-set 1751..1821 CDD:369462
Ig 1843..1935 CDD:319273
Ig 1949..2031 CDD:386229
Ig 2044..2115 CDD:386229
I-set 2134..2214 CDD:369462
I-set 2226..2309 CDD:369462
Ig_3 2313..2390 CDD:372822
Ig 2429..2491 CDD:319273
I-set 2501..2590 CDD:369462
I-set 2605..2686 CDD:369462
I-set 2704..2785 CDD:369462
Ig 2818..2881 CDD:319273
I-set 2902..2983 CDD:369462
I-set 3005..3075 CDD:369462
I-set 3087..3170 CDD:369462
Ig 3192..3260 CDD:319273
Ig 3267..3361 CDD:386229
I-set 3377..3453 CDD:369462
I-set 3468..3546 CDD:369462
IG_like 3558..3639 CDD:214653
I-set 3652..3732 CDD:369462
I-set 3736..3823 CDD:369462
Ig 3846..3912 CDD:319273
Ig 3937..4004 CDD:319273
Ig 4028..4090 CDD:319273
I-set 4102..4188 CDD:369462
Ig 4209..4276 CDD:319273
I-set 4283..4368 CDD:369462
Ig 4387..4458 CDD:386229
I-set 4463..4549 CDD:369462
TSP1 4556..4607 CDD:214559
TSP1 4612..4664 CDD:214559
TSP1 4669..4721 CDD:214559
TSP1 4726..4778 CDD:214559
TSP1 4783..4835 CDD:214559
TSP1 4840..4892 CDD:214559
G2F 4891..5115 CDD:214774
EGF_CA 5130..5169 CDD:214542
EGF_CA 5170..5213 CDD:311536
EGF_CA 5215..5252 CDD:214542
EGF_CA 5253..5286 CDD:238011
EGF_CA 5295..5336 CDD:311536
EGF_CA 5338..5377 CDD:214542
EGF_CA 5455..5494 CDD:214542
EGF_CA 5495..5531 CDD:214542
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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