DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr15 and nectin3b

DIOPT Version :10

Sequence 1:NP_731672.1 Gene:dpr15 / 41473 FlyBaseID:FBgn0037993 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_001014326.1 Gene:nectin3b / 541491 ZFINID:ZDB-GENE-050327-14 Length:574 Species:Danio rerio


Alignment Length:424 Identity:81/424 - (19%)
Similarity:132/424 - (31%) Gaps:149/424 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 PPTIDDYQTIISQAGTHAYLPCNVK---QLVKKPISWLR-MRDGHI-LTVDQTTFIAD-----QR 244
            ||.::      :..|.:..|.|.|:   .|.....||.| :.:|.: |.|....|...     :|
Zfish    42 PPKVN------AVLGKNVTLSCRVQVDTNLSLTQSSWERKLPNGWVTLAVYNPMFGISIPPDYER 100

  Fly   245 FQSVFSPNPERWSLQIKYVQLKDEGTYECQVSTEP----KASAIVHLRIVEPKTELIGESTRHVK 305
            ..|..||:....::.::.|...|.|.|.|:|:|.|    :||..|.: :||||..:...|:..:.
Zfish   101 RLSFRSPSALDATIMLEDVGFADIGVYTCKVATFPLGNTQASTTVSV-LVEPKVYVSAGSSALID 164

  Fly   306 AGSQVKLRCIISQALEPPLFINW---FYNQKQIYLHNRRGWRTEIERIDLPAEVPTTSTTTTTTT 367
            .|::..:...|::...||..::|   .|...:.::..                            
Zfish   165 GGNETTVATCIAERARPPADVSWETNLYGMSEAHMQE---------------------------- 201

  Fly   368 TTASTTTTTTSTTPATPSTTATGSTEGATSSETLNGLVTITR----------SYILDAISQNDVS 422
             .|:.||||.......||..|.|.|           |..:.:          .||::.....|:.
Zfish   202 -DANGTTTTQVHYIWQPSRHAQGHT-----------LTCVVKHPALQSDFRIPYIINVQFAPDIL 254

  Fly   423 ELGAAAGVAVATETSTAQLLTEVEATSSTSGTSTGAGLLASTSAAYAAGAAAGITTAATGDSAAT 487
            .||......|..|  ..||....:|.                                      .
Zfish   255 VLGYDGDWYVGRE--NVQLKCRAKAN--------------------------------------P 279

  Fly   488 AATTSAWLTTMDAEAATTAATTTTTMLPSSSFIKQITTASLIIPAVVKLDSGNYTCSPSN----- 547
            .|....|: .:|.|....|.....|::    |.:.:.          |.|||.|.|..:|     
Zfish   280 PAQHFRWI-RLDGEMPNGAERVNNTLV----FTRPLQ----------KNDSGVYRCEVANDIGLH 329

  Fly   548 ---------------SAPRTIVLHVLNGEYSASA 566
                           :.|.|..:.:|..:.||:|
Zfish   330 SRDIRIRIQDPPSTTTMPPTTPVRLLTADISATA 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr15NP_731672.1 V-set 204..290 CDD:462230 27/99 (27%)
nectin3bNP_001014326.1 Ig 37..148 CDD:472250 29/112 (26%)
Ig strand B 53..57 CDD:409470 1/3 (33%)
Ig strand C 69..73 CDD:409470 1/3 (33%)
Ig strand E 112..116 CDD:409470 0/3 (0%)
Ig strand F 126..131 CDD:409470 2/4 (50%)
Ig strand G 140..143 CDD:409470 1/2 (50%)
IgC1_2_Nectin-3-4_like 151..247 CDD:409501 22/135 (16%)
Ig strand A 151..157 CDD:409501 2/5 (40%)
Ig strand B 170..177 CDD:409501 1/6 (17%)
Ig strand C 182..188 CDD:409501 1/5 (20%)
Ig strand C' 190..192 CDD:409501 0/1 (0%)
Ig strand D 194..201 CDD:409501 0/6 (0%)
Ig strand E 207..215 CDD:409501 3/7 (43%)
Ig strand F 225..232 CDD:409501 2/17 (12%)
Ig strand G 238..244 CDD:409501 0/5 (0%)
IG_like 267..337 CDD:214653 18/124 (15%)
Ig strand B 269..273 CDD:409353 2/3 (67%)
Ig strand C 282..287 CDD:409353 0/4 (0%)
Ig strand E 302..306 CDD:409353 1/7 (14%)
Ig strand F 317..322 CDD:409353 2/4 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 442..484
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 498..549
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.