DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr15 and Dscam3

DIOPT Version :9

Sequence 1:NP_001287299.1 Gene:dpr15 / 41473 FlyBaseID:FBgn0037993 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster


Alignment Length:764 Identity:153/764 - (20%)
Similarity:251/764 - (32%) Gaps:224/764 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ELAKMPRRLILLALL--ICLPAIRGQ--AEETSILNSNGTNGRAFQRTQSRREALIPATTQMAQT 62
            :|:.:..|.::||..  :.:.::|.:  ..:.|.|.:|..||.     :.|.:|::....::::.
  Fly   184 DLSDVAGRYVVLAASGDLYVRSVRSEDGLMKFSCLVTNTLNGE-----RQRSDAVMLQVKELSKN 243

  Fly    63 LDKASAFRPTMAAAL----DAAAP-------------NRSSNNVAINNISNNGDQRLRLTAALEA 110
            |...:..:|.|...:    |...|             .|.|::.|:..|.::  ||:.|:..|  
  Fly   244 LAPRTTQKPVMEIHVERGNDVHLPCNIQGNPFPIFTWYRVSDSAALYPIPSS--QRVILSRTL-- 304

  Fly   111 NLIMSNRNVQEQHSYRITQDNATSAASIAPNGTAFGDAP-SIPIGVAPATTTTIDPATTTPTTTT 174
             |::.|            .|...:...|......||:.. .|.:.|....:..|.|..       
  Fly   305 -LLIKN------------ADERDAGKWICQASNQFGEQRIEIRLSVNSYVSVHILPQV------- 349

  Fly   175 RRTTRRPVATTTLKPPPTIDDYQTIISQAGTHAYLPCNVKQLVKKPISWLRMRDGHILTVDQ--T 237
                                   .|::..|| |...|.........|.||  .:|..|..:.  |
  Fly   350 -----------------------QIVNSGGT-ANFNCTTTGSAIDAIDWL--HNGKPLQANNALT 388

  Fly   238 TFIADQRFQSVFSPNPERWSLQIKYVQLKDEGTYECQVSTE-PKASAIVHLRIVEPKTELIGE-S 300
            |...:.||.|       :.||.::.|..:|.|.|:|.|..: ..|.|:..|::.:...|||.. .
  Fly   389 TGRDNIRFLS-------KSSLLVQNVGRRDRGVYQCLVENQRASAQAMAELKLGDTVPELIYTFI 446

  Fly   301 TRHVKAGSQVKLRCIISQALEPPLFINWFYNQKQIY---LHNRRGWRTEIERIDLPAEVPTTSTT 362
            .::|:.|..:.|:|..|.: .||.|. |..:.:.|.   ||:|....   :.:|:..:|      
  Fly   447 EQNVRPGPLISLKCSASGS-PPPQFA-WLLDSQPIMDVSLHHRFAIG---QFVDMSGDV------ 500

  Fly   363 TTTTTTTASTTTTTTSTTPATPSTTATGSTEGATSSETLNGLVTITRSYILDAISQNDVSELG-- 425
                       .:..:.:...|.   .|......:|   |.:.::..|..|:......|..:|  
  Fly   501 -----------ISHLNISHVRPD---DGGLYKCVAS---NSMGSVQHSARLNVYGPPYVRAIGPI 548

  Fly   426 -AAAGVAVATETSTAQLLTE--------VEATSST----SGTSTGAGLLASTSAAYAAGAAAGIT 477
             |.||..:......|....|        .|.|:|.    :..:.|..|:...   ...|...||.
  Fly   549 KAVAGEDIIVHCPFAGYPVEQIRWEKAHQELTTSNHYELASVADGGQLVIKN---VEPGRDQGIY 610

  Fly   478 TAATGDSAATAATTSAWLTTMD----------------AEAATTAATTTTTM------------L 514
            |......|...|.....|....                ..|..|.|.::..|            :
  Fly   611 TCIVRSRAGEEARRDMQLNVNSPPVIEPFKFPKNLQEGGRAQITCAVSSGDMPIYFSWKKDDSSI 675

  Fly   515 PSSSFI---KQITTASLIIPAVVKLDSGNYTCSPSNSAPR---TIVLHV-----LNGEYSASAIK 568
            |||..|   |:...:.|:...:....||.|||..||:|.:   |..|.|     ...|...:||.
  Fly   676 PSSLQITEKKEEFYSLLVFKDISARHSGKYTCYASNAAAKVNYTAELQVRVAPRWRYEPMDTAIM 740

  Fly   569 SGSVSWSALIGC--HGY--------------------LHWRNVSTLLTLLWIIKFALARD----I 607
            .|:   :..|.|  .||                    |..||.|.||.|      |...|    :
  Fly   741 LGN---TISINCEAEGYPIPTITWFKGQGKGSKDFKPLSMRNHSLLLNL------ATDNDEGYYM 796

  Fly   608 CQPNATSKATTRTSLLRAGDGATADVTRETGPKSGASFHRVSSSISATK 656
            ||  ||::.           ||....|........|.|.:.:.:||:.:
  Fly   797 CQ--ATNEI-----------GAGLKKTIRINVNEPARFEQSARNISSRR 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr15NP_001287299.1 IG_like 197..289 CDD:214653 26/94 (28%)
V-set 204..290 CDD:284989 25/88 (28%)
Dscam3NP_996226.2 IG 56..133 CDD:214652
Ig 56..125 CDD:143165
I-set 246..337 CDD:254352 19/107 (18%)
Ig 264..334 CDD:143165 15/86 (17%)
I-set 345..433 CDD:254352 27/127 (21%)
Ig 358..431 CDD:143165 22/81 (27%)
Ig 456..533 CDD:143165 18/104 (17%)
IGc2 553..619 CDD:197706 12/68 (18%)
I-set 634..724 CDD:254352 20/89 (22%)
ig 645..712 CDD:278476 16/66 (24%)
IG_like 734..815 CDD:214653 23/102 (23%)
Ig 745..815 CDD:299845 20/88 (23%)
I-set 820..913 CDD:254352 3/13 (23%)
Ig 838..920 CDD:299845
FN3 917..1033 CDD:238020
FN3 1040..1142 CDD:238020
fn3 1150..1237 CDD:278470
FN3 1263..1345 CDD:238020
Ig 1350..1436 CDD:299845
IG_like 1358..1436 CDD:214653
FN3 1441..1530 CDD:238020
FN3 1542..1620 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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