DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr15 and Dscam1

DIOPT Version :9

Sequence 1:NP_001287299.1 Gene:dpr15 / 41473 FlyBaseID:FBgn0037993 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_001246162.1 Gene:Dscam1 / 35652 FlyBaseID:FBgn0033159 Length:2038 Species:Drosophila melanogaster


Alignment Length:553 Identity:105/553 - (18%)
Similarity:180/553 - (32%) Gaps:161/553 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 PPPTIDDYQTIISQAGTHAYLPCNVKQLVKKPISWL-RMRDGHILTVDQTTFIADQRF---QSVF 249
            ||...:..:...::.|..|.|.|..|.  :|||..| .|.:   :.:|...   |.|:   :.:.
  Fly   818 PPEFTEKLRNQTARRGEPAVLQCEAKG--EKPIGILWNMNN---MRLDPKN---DNRYTIREEIL 874

  Fly   250 SPNPERWSLQIKYVQLKDEGTYECQVSTEPKAS--AIVHLRIVE-PK----TELIGESTRHVKA- 306
            |..... ||.||..:..|...:.| |:|....|  |.:::.:.| |:    .:::.:|.|.|:. 
  Fly   875 STGVMS-SLSIKRTERSDSALFTC-VATNAFGSDDASINMIVQEVPEMPYALKVLDKSGRSVQLS 937

  Fly   307 ------GSQVKLRCIISQALEPPLFINWFYNQKQIYLHNRRGWRTEIERIDLP-----AEVPTTS 360
                  |:....|.||.                  :..:|..| :||:|:.:|     |:|...|
  Fly   938 WAQPYDGNSPLDRYIIE------------------FKRSRASW-SEIDRVIVPGHTTEAQVQKLS 983

  Fly   361 TTTT---------TTTTTASTTTTTTSTTPATPSTTATGSTEGATSSETL------------NG- 403
            ..||         ...|:.|:...|..|....||...........:..|:            || 
  Fly   984 PATTYNIRIVAENAIGTSQSSEAVTIITAEEAPSGKPQNIKVEPVNQTTMRVTWKPPPRTEWNGE 1048

  Fly   404 ---------LVTITRSYILDAISQNDVSELGAAAGVAVATETSTAQLLTEVEATSSTSGTSTGAG 459
                     |.....||:.:.|  |.::|.|....:.:.......|....::|.:     ..|||
  Fly  1049 ILGYYVGYKLSNTNSSYVFETI--NFITEEGKEHNLELQNLRVYTQYSVVIQAFN-----KIGAG 1106

  Fly   460 LLASTSAAYAAGAAAGITTAATGDSAATAATTS----AWLTTMDAEAATTAATTTTTMLPSSSF- 519
            .|:.....:   .|.|..:....|:|.|..|:.    .|::.....|.....|......||..: 
  Fly  1107 PLSEEEKQF---TAEGTPSQPPSDTACTTLTSQTIRVGWVSPPLESANGVIKTYKVVYAPSDEWY 1168

  Fly   520 ------IKQITTASLIIPAVVKLDSGNYT-----CSPSNSAPRTIVLH------VLNGEYSASAI 567
                  .|:..::..::..:.|..  |||     .:......|::.:|      |........|:
  Fly  1169 DETKRHYKKTASSDTVLHGLKKYT--NYTMQVLATTAGGDGVRSVPIHCQTEPDVPEAPTDVKAL 1231

  Fly   568 KSGS----VSWSALIGCHGYLHWRNVSTLLTLLWIIKFALARDICQPNATSKATTRTSLLRAGDG 628
            ..|:    |||                              |...|||.   ..|:.::....:|
  Fly  1232 VMGNAAILVSW------------------------------RPPAQPNG---IITQYTVYSKAEG 1263

  Fly   629 ATADVTRETGPKSGASFHRVSSSISATKVAEDK 661
            |..:...:..|....||       .||::.::|
  Fly  1264 AETETKTQKVPHYQMSF-------EATELEKNK 1289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr15NP_001287299.1 IG_like 197..289 CDD:214653 24/97 (25%)
V-set 204..290 CDD:284989 24/91 (26%)
Dscam1NP_001246162.1 Ig 38..130 CDD:299845
IG 57..133 CDD:214652
IG_like 267..343 CDD:214653
Ig 269..340 CDD:143165
IG_like 353..425 CDD:214653
IGc2 361..413 CDD:197706
I-set 433..527 CDD:254352
IGc2 446..517 CDD:197706
I-set 533..618 CDD:254352
IGc2 544..607 CDD:197706
Ig 641..714 CDD:143165
IGc2 735..804 CDD:197706
I-set 819..914 CDD:254352 25/104 (24%)
Ig 833..921 CDD:299845 26/97 (27%)
FN3 918..1011 CDD:238020 22/111 (20%)
FN3 1018..1116 CDD:238020 16/107 (15%)
FN3 1124..1217 CDD:238020 16/94 (17%)
FN3 1222..1312 CDD:238020 18/108 (17%)
Ig 1339..1406 CDD:299845
FN3 1409..1499 CDD:238020
FN3 1504..1584 CDD:238020
Dscam_C 1890..2008 CDD:289151
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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