DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr15 and ncam1a

DIOPT Version :9

Sequence 1:NP_001287299.1 Gene:dpr15 / 41473 FlyBaseID:FBgn0037993 Length:662 Species:Drosophila melanogaster
Sequence 2:XP_009293555.1 Gene:ncam1a / 30447 ZFINID:ZDB-GENE-990415-31 Length:1010 Species:Danio rerio


Alignment Length:608 Identity:131/608 - (21%)
Similarity:203/608 - (33%) Gaps:173/608 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 SSNNVAINNI--SNNGDQ----RLRLTAALEANLIMSNRNVQEQHSYRITQDNATS----AASIA 139
            |:|::.|..|  ::.||.    |:.....::..:|....||......|.|:.|||:    |.::|
Zfish   167 SNNHLQIRGIKKTDEGDYTCEGRIMARGEIDLRVIKVIVNVLPSIRTRYTELNATADINQAVTLA 231

  Fly   140 PNGTAFGDAPSIPIGVAPATTTTIDPATTTPTTTTRRTTRRPVATTTLKPPPTID--DYQTII-S 201
            .:...:           |..|.......|...:..:.:.....:..|:|....:|  ||:.|. :
Zfish   232 CHADGY-----------PEPTVKWARGNTELESDEKYSLNEDGSELTIKDVNKLDEGDYKCIARN 285

  Fly   202 QAGTHA-YLPCNVKQLVKKPISWLRMRDGHIL----------TVDQTTFIADQRFQSVFSPN--- 252
            :||..: .:..||  .|:..|::|..:....|          |.|.|..|.....:.||:.|   
Zfish   286 KAGERSEEVTLNV--FVQPKITFLENQTASELEEQITLTCEATGDPTPNIIWSFGRRVFTENEQA 348

  Fly   253 ----PERW----------------SLQIKYVQLKDEGTYECQVST---EPKASAIVHLRIVEPKT 294
                ||:.                ||.:||||..|.|.|.|....   :...|..:.:|.. ||.
Zfish   349 SWTRPEKHKSLDGNVVVRSDARVSSLTLKYVQFTDAGQYLCTARNSIGQDIQSMYLEVRYA-PKI 412

  Fly   295 ELIGESTRHVKAGSQVKLRCIISQAL-EPPLFINWFYNQKQIYLHNRRGWRTEIERIDLPAEVPT 358
            :  |........|:...:.|   :|| .|...:.||.:.:|                 ||     
Zfish   413 Q--GPQAVFTWEGNPANITC---EALAHPGASVLWFRDGQQ-----------------LP----- 450

  Fly   359 TSTTTTTTTTTASTTTTTTSTTPATPSTTATGSTEGATSSETLNGLVTITRSYILDAISQNDVSE 423
                :..||......|.|.|....||.:.   :..|:.:....|.:.|.::.:||   .|.||. 
Zfish   451 ----SANTTNVKIYNTPTVSFLEVTPDSQ---NDFGSYNCTATNVIGTESKEFIL---VQADVP- 504

  Fly   424 LGAAAGVAVATETSTAQLLTEVEATSSTSGTS-----------------------------TGAG 459
             .|.:...|...:|||.:  |.|..:|:.|..                             |..|
Zfish   505 -SAPSIERVEPYSSTAMI--EFEEPASSGGVPVLKYKAEWRIAGQDWTDREYELEDGLNLITIVG 566

  Fly   460 LLASTSAAYAAGAAAGITTAATGDSAATAA--TTSAWLT-TMDAEAATTAATTTTTM-------- 513
            |...|:......|..|   ...|:|:|..:  |....|. .|..|..|:...||..:        
Zfish   567 LKPETTYEVKISAING---KGEGESSAPESFKTQPVRLPFRMSPETPTSIPPTTADIKGEPNPPK 628

  Fly   514 ---LPSSS-------FIKQITTASLIIPAVVKLDSGN-YTCSPSNSAPRT---IVLHVL--NGEY 562
               .|.|:       ||||....|.|...:|:..:.| ....|....|..   |||..|  |.||
Zfish   629 LEAKPQSTGNEMKVHFIKQDDGGSPIKHYLVRYRAKNRQDWKPEIRMPDASDYIVLRGLDWNTEY 693

  Fly   563 SASAI--------KSGSVSWSAL 577
            ....|        :.|::|:..|
Zfish   694 EVYVIAENQRGRSEPGTLSFRTL 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr15NP_001287299.1 IG_like 197..289 CDD:214653 29/129 (22%)
V-set 204..290 CDD:284989 28/122 (23%)
ncam1aXP_009293555.1 Ig 20..112 CDD:299845
I-set 21..111 CDD:254352
IG_like 121..200 CDD:214653 7/32 (22%)
IGc2 128..189 CDD:197706 6/21 (29%)
Ig 208..301 CDD:299845 20/105 (19%)
IG_like 219..298 CDD:214653 16/89 (18%)
Ig 300..406 CDD:299845 24/105 (23%)
IG_like 308..406 CDD:214653 21/97 (22%)
ig 413..498 CDD:278476 21/118 (18%)
IG_like 415..498 CDD:214653 20/114 (18%)
fn3 505..589 CDD:278470 16/88 (18%)
FN3 624..715 CDD:238020 22/90 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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