DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr15 and Lrit1

DIOPT Version :9

Sequence 1:NP_001287299.1 Gene:dpr15 / 41473 FlyBaseID:FBgn0037993 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_647547.2 Gene:Lrit1 / 246214 RGDID:628607 Length:623 Species:Rattus norvegicus


Alignment Length:276 Identity:59/276 - (21%)
Similarity:95/276 - (34%) Gaps:77/276 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 RPVATTTLKPPPTIDDYQTIISQAGTHAYLPCNVKQLVKKPISWLRMRDGHIL--TVDQTTFIAD 242
            |...:..|:|..|     :|||..|:...|.|....:....:|| |..:|..|  ||.|..    
  Rat   249 RKCQSPELRPGVT-----SIISPLGSTVLLRCGATGIPGPEMSW-RRANGRPLNGTVHQEV---- 303

  Fly   243 QRFQSVFSPNPERWS-LQIKYVQLKDEGTYECQVSTEPKAS-AIVHLRIVEPKTEL--------- 296
                   |.:...|: |.:..|.|.|.|.|.||......|| .::.|.:.||:|..         
  Rat   304 -------SSDGSSWTLLDLPVVSLFDSGDYICQAKNFLGASETLISLIVTEPQTSTEYTGIPGAL 361

  Fly   297 ---IGESTRHVKAGSQVKLRCI------ISQALEP--PLFINWFYNQKQIYLHNRRGWRTEIERI 350
               .||........:::..|.:      ::.|.:|  |..      ::::.|.|        .::
  Rat   362 WARTGEGAEAAAYNNKLVARHVPHVPEPVALATKPSVPSI------KEELPLQN--------FQM 412

  Fly   351 DLPAEV---PTTSTTTTTTTTTASTTTTTTSTT-----PATPSTTATG--------------STE 393
            |:|.|.   |:....|....:......|..|.:     |...:|||..              :.|
  Rat   413 DVPGEFSREPSEHQETQMVRSLKVVGDTYHSVSLVWKAPQAGNTTAFSVLYAVFGQRDMRRMTVE 477

  Fly   394 GATSSETLNGLVTITR 409
            ...:|.|:.||...|:
  Rat   478 AGKTSVTIEGLAPKTK 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr15NP_001287299.1 IG_like 197..289 CDD:214653 27/95 (28%)
V-set 204..290 CDD:284989 24/89 (27%)
Lrit1NP_647547.2 LRRNT 23..61 CDD:214470
LRR 1 60..81
LRR_8 63..143 CDD:290566
leucine-rich repeat 64..84 CDD:275378
LRR 2 84..105
leucine-rich repeat 85..132 CDD:275378
LRR 3 108..128
LRR_8 131..>176 CDD:290566
LRR_4 131..172 CDD:289563
LRR 4 132..153
leucine-rich repeat 133..156 CDD:275378
LRR 5 156..177
leucine-rich repeat 157..180 CDD:275378
leucine-rich repeat 181..205 CDD:275378
TPKR_C2 201..>240 CDD:301599
Ig 257..345 CDD:299845 29/104 (28%)
IG_like 267..345 CDD:214653 24/89 (27%)
FN3 431..501 CDD:214495 12/63 (19%)
LRR 6 525..548
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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