DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr15 and rig-4

DIOPT Version :9

Sequence 1:NP_001287299.1 Gene:dpr15 / 41473 FlyBaseID:FBgn0037993 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_501339.2 Gene:rig-4 / 177597 WormBaseID:WBGene00004371 Length:2325 Species:Caenorhabditis elegans


Alignment Length:727 Identity:142/727 - (19%)
Similarity:239/727 - (32%) Gaps:192/727 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 IRGQAEETSILNSNGTNGRAFQRTQSRREALI---PATTQMAQTLDKASAFRPTMAAALDAAAP- 82
            ||...|.......:|:|.:|....|...::||   ||        |:.|.....:..:.:.|.. 
 Worm   518 IRKSDEGEYTCEISGSNVKATANVQVNGDSLIEYGPA--------DQKSLIGTNVEFSCEVAKEY 574

  Fly    83 -NRSSNNVAINNI--SNNGDQRLRLTAALEANLIMSNRNVQEQHSY--RITQD------------ 130
             .::|....:|::  ..||:..||::...:.:||:..........|  |:|.|            
 Worm   575 VRKASVEWYLNDVLLPVNGNSGLRISRNRKGSLIIRQVGPDNTGEYRCRVTVDGREENASAMLQI 639

  Fly   131 ---------------NATSAASIAP--NGTAFGDAPSI----------PIGVAPATTTTID---- 164
                           |.|..|.:..  |....|:.|.|          |.|:....||.||    
 Worm   640 IEKPAMPERVRAELHNETMPAKVRVRWNEGFDGNEPIIKHAIEMRTMGPTGLWSDWTTAIDNIPK 704

  Fly   165 ----PATTTPTTTTRRTTR---RPVATTTLKP-PPTIDDYQTIISQAGTHAYLPCNVKQLVKKP- 220
                |...|.....|.::.   |.||:....| .|::..|...:.|....| .|.||....:.| 
 Worm   705 EEGKPCCWTDIEDLRPSSTAEFRVVASNKHGPGKPSLPSYSVTMPQQPPSA-APRNVAASARSPH 768

  Fly   221 ---ISWLRMRDGHILTVDQTTFIADQRFQSVFSPNPERWSLQIKYVQ--LKDE----GTYECQVS 276
               :.|.:.:: .:.:.|...::...|.....|......:|..|..:  |.||    ..||.||:
 Worm   769 SVMVQWQQPKE-ELDSGDVLGYVVRYRLAGYSSLTWNEKNLTTKDARNTLVDELITWREYEIQVA 832

  Fly   277 TEPKASAIVHLRIVEPKTELIGESTRHVKAGSQVKLRCIISQALEPPLFINWFYNQKQ----IYL 337
            ...|..    |.:.....|:.....|..:|...|:::.:.|.|:.    |.:...::|    :.|
 Worm   833 AYNKRG----LGVFSESIEVTTSEGRPTQAPKNVRVKVLNSTAVA----IEFTAPEQQRIPGVNL 889

  Fly   338 -HNRRGWRTEIERIDLPAEV---PTTSTTTTTTTTTAS----TTTTTTSTTP-----------AT 383
             :..:.|:.|.|:.:|..:|   |.....||.......    ..||...|||           .|
 Worm   890 GYKVQFWKGEPEKGELYKQVILDPDRRQLTTVVNELEKFGHYNLTTLCFTTPGDGPRSNVVKVVT 954

  Fly   384 PSTTATGSTEGATSSETLNGLVTITRSYILDAISQNDVSELGAAAGVAVAT----ETSTAQLLTE 444
            ...|.....|.:.:....||.|....|    .:.||.:        |...|    ..|:..:.|:
 Worm   955 EEDTPESVDELSIAEVMYNGAVITWNS----PLKQNGI--------VTKYTIRHWAASSPDVKTK 1007

  Fly   445 VEATSSTS---------GTSTGAGLLAST--------SAAYAAGAAAGI----TTAATGDSAATA 488
            .|...||:         .|..|..::|||        ...:.:|....:    :..:.||.:||.
 Worm  1008 HEVDGSTTNFTIDGLQPSTRYGVDVMASTRKGDGPVEETKFESGVPPELPGRPSMLSIGDISATT 1072

  Fly   489 ------------------------ATTSAWLTTMDAEAATTAATTTTTMLPSSSFIKQITTASLI 529
                                    |.:|.:....:..|....:.|.|.:.|.:.:..::...::.
 Worm  1073 VQLHFTPGFDGHTAIRQWVVEGKMADSSVFAHVFNVSAPKARSITVTGLRPFTQYQLRLIAENVK 1137

  Fly   530 IPAVVKLDSGNYTCSPSNSAPRTIVLHVLNGEYSASAIKSGSVSWSALIGCH------GYL---- 584
            ........|.::....:|  |.|....:.....||::|   ||||:.|:..|      |||    
 Worm  1138 GRGAPSEPSRSFETLQTN--PDTPSQRLFAEPVSATSI---SVSWTPLLATHWNGQPKGYLIVYR 1197

  Fly   585 -----HWRNVST 591
                 :|:.|.|
 Worm  1198 EIDDENWKEVRT 1209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr15NP_001287299.1 IG_like 197..289 CDD:214653 21/101 (21%)
V-set 204..290 CDD:284989 20/95 (21%)
rig-4NP_501339.2 IG_like 330..402 CDD:214653
IGc2 338..393 CDD:197706
I-set 459..543 CDD:254352 6/24 (25%)
IGc2 478..534 CDD:197706 4/15 (27%)
IG_like 553..639 CDD:214653 17/93 (18%)
Ig 564..635 CDD:143165 13/70 (19%)
FN3 643..747 CDD:238020 22/103 (21%)
FN3 756..850 CDD:238020 20/98 (20%)
FN3 858..954 CDD:238020 20/99 (20%)
FN3 959..1042 CDD:238020 19/94 (20%)
FN3 1057..1151 CDD:238020 11/93 (12%)
FN3 1156..1251 CDD:238020 17/57 (30%)
FN3 1258..1356 CDD:238020
FN3 1361..1453 CDD:238020
FN3 1464..1560 CDD:238020
FN3 1572..1664 CDD:238020
FN3 1679..1764 CDD:238020
FN3 1774..1858 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.