DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr15 and L1cam

DIOPT Version :9

Sequence 1:NP_001287299.1 Gene:dpr15 / 41473 FlyBaseID:FBgn0037993 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_032504.3 Gene:L1cam / 16728 MGIID:96721 Length:1259 Species:Mus musculus


Alignment Length:304 Identity:71/304 - (23%)
Similarity:110/304 - (36%) Gaps:74/304 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 NSNGTNGRAFQRTQSRREALIPATTQMAQTLDKASAFRPTMAAALDAAAPNRSSNNVA--INNIS 95
            ||.|:...|:..|.   || .|...|..|    :..:.|...|.||.....|....:.  ||.:|
Mouse   315 NSLGSARHAYYVTV---EA-APYWLQKPQ----SHLYGPGETARLDCQVQGRPQPEITWRINGMS 371

  Fly    96 N---NGDQRLRLTAALEANLIMSNRNVQEQHSYRITQDNATSAASIAPNGTAFGDAPSIPIGVAP 157
            .   |.||:.|:.   :.:||:|  |||...: .:||..|.:     .:|....:| .|.:...|
Mouse   372 METVNKDQKYRIE---QGSLILS--NVQPSDT-MVTQCEARN-----QHGLLLANA-YIYVVQLP 424

  Fly   158 ATTTTIDPATTTPTTTTRRTTRRPVATTTLKPPPTIDDYQTIISQAGTHAYLPCNVKQLVKKPIS 222
            |...|                               .|.||.::..|:.|||.|.........:.
Mouse   425 ARILT-------------------------------KDNQTYMAVEGSTAYLLCKAFGAPVPSVQ 458

  Fly   223 WLRMRDGHILTVDQTTFIADQRFQSVFSPNPERWSLQIKYVQLKDEGTYECQVSTEP-KASAIVH 286
            |        |..:.||.:.|:||...     ...:|.|:.:|..|.|.|.||.:.:. ..:.:.:
Mouse   459 W--------LDEEGTTVLQDERFFPY-----ANGTLSIRDLQANDTGRYFCQAANDQNNVTILAN 510

  Fly   287 LRIVEPKTELIGESTRHVKAGSQVKLRCIISQALEPPL--FINW 328
            |::.|......|..:...|.|::|...|  ..:.:|.|  .|.|
Mouse   511 LQVKEATQITQGPRSAIEKKGARVTFTC--QASFDPSLQASITW 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr15NP_001287299.1 IG_like 197..289 CDD:214653 23/92 (25%)
V-set 204..290 CDD:284989 21/86 (24%)
L1camNP_032504.3 Ig_L1-CAM_like 53..130 CDD:319299
Ig 133..227 CDD:386229
Ig3_L1-CAM 259..329 CDD:143284 5/16 (31%)
Ig 346..421 CDD:386229 23/86 (27%)
IG_like 433..513 CDD:214653 23/92 (25%)
Ig 518..607 CDD:386229 9/37 (24%)
Cell attachment site. /evidence=ECO:0000255 553..555 71/304 (23%)
Cell attachment site. /evidence=ECO:0000255 562..564
FN3 611..708 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 697..724
fn3 717..798 CDD:365830
fn3 824..904 CDD:365830
fn3 920..1002 CDD:365830
Bravo_FIGEY 1146..1231 CDD:372781
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1182..1209
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1228..1259
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.