DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr15 and Dscam

DIOPT Version :9

Sequence 1:NP_001287299.1 Gene:dpr15 / 41473 FlyBaseID:FBgn0037993 Length:662 Species:Drosophila melanogaster
Sequence 2:XP_006522949.1 Gene:Dscam / 13508 MGIID:1196281 Length:2034 Species:Mus musculus


Alignment Length:602 Identity:106/602 - (17%)
Similarity:189/602 - (31%) Gaps:178/602 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RGQAEETSIL--NSNGTNGRAFQRTQSRREALIPATTQMAQTLDKASAFRPTMAAALDAAAPNRS 85
            |.|...|.:|  ||..::..::....|.|..       .|:.:.:....:|..|........:..
Mouse   270 RFQKTVTGLLIENSRPSDSGSYVCEVSNRYG-------TAKVIGRLYVKQPLKATISPRKVKSSV 327

  Fly    86 SNNVAIN-NISNNGDQRL---------------RLTAALEANLIMSNRNVQEQHSYR--ITQDNA 132
            .:.|::: :::.|.||.|               |:|....|||||.:....:..:|:  :.:|..
Mouse   328 GSQVSLSCSVTGNEDQELSWYRNGEILNPGKNVRITGLNHANLIMDHMVKSDGGAYQCFVRKDKL 392

  Fly   133 TS---AASIAPNGT-----AFGD---APSIPIGVA--------PATTTTIDPATTTPTTTTR--- 175
            ::   ...:..:||     ||.:   :|:.|:.:.        |..|.|:|.......:..|   
Mouse   393 SAQDYVQVVLEDGTPKIISAFSEKVVSPAEPVSLVCNVKGTPLPTVTWTLDDDPILKGSGHRISQ 457

  Fly   176 -------------------------RTTRRPVATTTL-------KPPPTIDDYQTIISQAGTHAY 208
                                     |.|....|...|       :.|.:|...:.|.:.||...|
Mouse   458 MITSEGNVVSYLNISSSQVRDGGVYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTY 522

  Fly   209 LPCNVKQLVKKPISWLRMRDGHILTVDQTTFIADQRFQSVFSPNPERWSLQIKYVQLK-DEGTYE 272
            :.|.|.......|.|  .::.::|..:..        |..|..|   .:|::..||.: |||.|.
Mouse   523 IHCRVIGYPYYSIKW--YKNANLLPFNHR--------QVAFENN---GTLKLSDVQKEVDEGEYT 574

  Fly   273 CQVSTEPK--ASAIVHLRIVEPKTELIGESTRHVKAGSQVKLRCIISQALEPPLFINWFYNQKQI 335
            |.|..:|:  .|..||:.:..|......|..| ...|.:|.:.|::... :.|:.|.|   ||. 
Mouse   575 CNVLVQPQLSTSQSVHVTVKVPPFIQPFEFPR-FSIGQRVFIPCVVVSG-DLPITITW---QKD- 633

  Fly   336 YLHNRRGWRTEIERIDLPAEVPTTSTTTTTTTTTASTTTTTTSTTPATPSTTATGSTEGATSSET 400
                             ...:|.:...|.......|:...:..:.....:.|.....|.|.....
Mouse   634 -----------------GRPIPASLGVTIDNIDFTSSLRISNLSLMHNGNYTCIARNEAAAVEHQ 681

  Fly   401 LNGLVTITRSYILDAISQNDVSELGAAAGVAVATETSTAQLLTEVEATSSTSGTSTGAGLLASTS 465
            ...:|.:...:::....|:.:                                            
Mouse   682 SQLIVRVPPKFVVQPRDQDGI-------------------------------------------- 702

  Fly   466 AAYAAGAAAGITTAATGDSAATAATTSAWLTTMDAEAATTAATTTTTMLPSSSFIKQITTASLII 530
                .|.|..:..:|.|    ....|..|      :.:..|.......:..:..|:.::..||:|
Mouse   703 ----YGKAVILNCSAEG----YPVPTIVW------KFSKGAGVPQFQPIALNGRIQVLSNGSLLI 753

  Fly   531 PAVVKLDSGNYTCSPSN 547
            ..||:.|||.|.|..||
Mouse   754 KHVVEEDSGYYLCKVSN 770

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr15NP_001287299.1 IG_like 197..289 CDD:214653 25/94 (27%)
V-set 204..290 CDD:284989 23/88 (26%)
DscamXP_006522949.1 Ig 15..115 CDD:386229
IGc2 239..300 CDD:197706 8/29 (28%)
IG 320..400 CDD:214652 14/79 (18%)
Ig_3 410..488 CDD:372822 11/77 (14%)
IGc2 518..575 CDD:197706 17/69 (25%)
Ig 596..686 CDD:386229 17/112 (15%)
Ig_DSCAM 707..784 CDD:143211 18/74 (24%)
Ig 802..889 CDD:386229
FN3 885..978 CDD:238020
FN3 986..1083 CDD:238020
FN3 1091..1184 CDD:238020
FN3 1189..1278 CDD:238020
Ig_3 1301..1363 CDD:372822
FN3 1380..1470 CDD:238020
FN3 1486..1555 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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