DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr15 and Dcc

DIOPT Version :9

Sequence 1:NP_001287299.1 Gene:dpr15 / 41473 FlyBaseID:FBgn0037993 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_031857.2 Gene:Dcc / 13176 MGIID:94869 Length:1447 Species:Mus musculus


Alignment Length:486 Identity:111/486 - (22%)
Similarity:163/486 - (33%) Gaps:122/486 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 ISQAGTHAYLPCNVKQLVKKP-ISWLRMRDGHILTVDQTTFIADQRFQSVFSPNPERWSLQIKYV 263
            ::..|.:..|.|:.:.....| |.|  .:||.||.:..     |.|.|.:  ||   .||.|:.:
Mouse    50 VTMRGGNVLLNCSAESDRGVPVIKW--KKDGLILALGM-----DDRKQQL--PN---GSLLIQNI 102

  Fly   264 -----QLKDEGTYECQVSTEPKASAI---VHLRIVEPKTELIGESTRHVKA--GSQVKLRC-IIS 317
                 ...|||.|:|:.|.....|.|   ..:.:..|...|  ..|..:.|  |..|.|:| :|.
Mouse   103 LHSRHHKPDEGLYQCEASLADSGSIISRTAKVTVAGPLRFL--SQTESITAFMGDTVLLKCEVIG 165

  Fly   318 QALEPPLFINWFYNQKQIYLHNRRGWRTEIERIDLPAE-----VPTTSTTTTTTTTTASTTTTTT 377
               ||...|:|..||:.:.              .||.:     :|:.:...:......|.....:
Mouse   166 ---EPMPTIHWQKNQQDLN--------------PLPGDSRVVVLPSGALQISRLQPGDSGVYRCS 213

  Fly   378 STTPATPSTTATGSTEGATSSETLNGLVTITRSYILDAISQNDVSELGAAAGVAVATETSTAQLL 442
            :..||:..|.........:.......|..:.|...:.||...|.......:|.   ...|...|.
Mouse   214 ARNPASIRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGY---PPPSFTWLR 275

  Fly   443 TE--VEATSSTSGTSTGAGLLASTSAAYAAGAAAGITTAATGDSAATAATT---SAWL------- 495
            .|  ::..|.......|:.||.|......:|....:.|....:.:|:|..|   ..|.       
Mouse   276 GEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNL 340

  Fly   496 ---TTMDA--EAATTAATTTT--------TMLPSSSFIKQITTAS-LIIPAVVKLDSGNYTCSPS 546
               .:||.  |.|.:.....|        .::||..|  ||...| |.|..|||.|.|.|.|...
Mouse   341 YAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYF--QIVGGSNLRILGVVKSDEGFYQCVAE 403

  Fly   547 NSAPRTIVLHVLNGEYSAS------AIKSGSVSWSALIGCHGYLHWRNV------STLLTLLWII 599
            |.|.        |.:.||.      ||.|.|:..||.         |:|      |..:.|.|  
Mouse   404 NEAG--------NAQSSAQLIVPKPAIPSSSILPSAP---------RDVLPVLVSSRFVRLSW-- 449

  Fly   600 KFALARDICQPNATSKATTRTSLL---RAGD 627
                     :|.|.:|...:|..:   |.||
Mouse   450 ---------RPPAEAKGNIQTFTVFFSREGD 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr15NP_001287299.1 IG_like 197..289 CDD:214653 26/97 (27%)
V-set 204..290 CDD:284989 26/94 (28%)
DccNP_031857.2 Ig1_Neogenin 42..136 CDD:143199 26/97 (27%)
IG_like 46..136 CDD:214653 26/97 (27%)
IG_like 147..224 CDD:214653 19/93 (20%)
IGc2 153..219 CDD:197706 16/82 (20%)
I-set 241..327 CDD:254352 17/88 (19%)
Ig 244..327 CDD:299845 17/85 (20%)
I-set 331..417 CDD:254352 26/95 (27%)
Ig 347..417 CDD:299845 24/79 (30%)
FN3 429..521 CDD:238020 14/63 (22%)
FN3 528..617 CDD:238020
FN3 625..715 CDD:238020
FN3 726..805 CDD:214495
FN3 846..939 CDD:238020
FN3 946..1041 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1126..1153
Neogenin_C 1148..1445 CDD:284094
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1166..1220
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1291..1329
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1394..1419
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.