DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr15 and vsig10

DIOPT Version :9

Sequence 1:NP_001287299.1 Gene:dpr15 / 41473 FlyBaseID:FBgn0037993 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_001093564.2 Gene:vsig10 / 100005564 ZFINID:ZDB-GENE-030131-7476 Length:529 Species:Danio rerio


Alignment Length:531 Identity:109/531 - (20%)
Similarity:182/531 - (34%) Gaps:110/531 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 QTIISQAGTHAYLPCNVKQLVKKPISWLRMRDGHILTVDQTTFIADQRFQSVFSPNP-------E 254
            |.:|.:.|.:..|.|....:....:.:...:||.:        :|.|.     .|||       |
Zfish    26 QFVIGEKGNNTTLHCLDHPVNASSVLYQWKKDGAV--------VATQN-----PPNPSVHLSISE 77

  Fly   255 RWSLQIKYVQLKDEGTYECQVSTEPKAS----AIVHLRI----------VEPKTELIGESTRHVK 305
            ...|:|..:||.|||.|||:...:...|    :.:.|.|          :.|.| .:...|..|.
Zfish    78 NGFLRISGLQLIDEGLYECESQAKGGRSWQTLSKIQLTIAAGPTGVSLDISPAT-FLNNGTLFVH 141

  Fly   306 AGSQVKLRCIISQALEPPLFINWFY-----NQKQIYLHNRRGWRTEIERIDLPAEVPTTSTTTTT 365
            .||.|...|  |....|...:.|..     :..:....::......|..|. |.:..|.:.|:..
Zfish   142 KGSNVNFSC--SSESNPSQNLTWTVDNLASDNPEREFGSKSPLAFSITNIQ-PLDQGTYTCTSQN 203

  Fly   366 TTTTASTTTTTTSTTPATPSTTATGSTE-GATSSETLNGLVTITRSYILDAISQNDVSELGAAAG 429
            |.:..:...|........|......|.| |...|:.| .:.:....|.:..::..:|.  |||.|
Zfish   204 TLSRRTANKTQELLVYYAPERHPECSWELGDKPSDVL-FICSWFGGYPVPTLTWQEVE--GAAEG 265

  Fly   430 VAVATETSTAQLLTEVEATSSTSGTSTGAGLLASTSAAYAAGAAAGITTA---ATGDSAATAATT 491
            ..:  ..:|:|...|:..:.:.|....|..:..:.........:...|..   .||...|||   
Zfish   266 PTI--NLTTSQQTEELNVSVNRSILHDGDKVKCTGHHVTGVEKSCSFTLKIPYPTGQPLATA--- 325

  Fly   492 SAWLTTMDAEAATTAATTTTTMLP--------------SSSFIKQIT--TASLIIPAVVKLDSGN 540
                  ::....|.:.|.|:::.|              :|.:|.|..  ..:|.|..|.|.|.|.
Zfish   326 ------LEGTNITISCTETSSLPPAKTVWKKNDDLIENTSKYIVQENRPALTLTIVNVTKADEGV 384

  Fly   541 YTCSPSNSAPRTIVLHVLNGEYSASAIKSGSVSWSALIGCHGYLHWRNVSTLLTLLWI---IKFA 602
            |.|...|......:...||       :|:.:.:..|::|..       ||.|:.::.|   :...
Zfish   385 YYCYSENPLGARELEVYLN-------VKTSAGNGGAIVGIF-------VSVLVMMIGIVVGVTVY 435

  Fly   603 LARD-ICQPNATSKA-TTRTSLLRAGDGATADVTRETGPK-----SG-----ASFHRVSS----S 651
            ..|| ||.....|:. ..|..:|...|....::..|..|:     :|     ...||:.|    .
Zfish   436 TKRDRICIGLRFSQLDDDRVDVLSLVDSDEEEIFHEAVPRLPPVTNGHATTLVEIHRIPSCDHED 500

  Fly   652 ISATKVAEDKT 662
            |:.:....|:|
Zfish   501 IADSTEQSDQT 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr15NP_001287299.1 IG_like 197..289 CDD:214653 25/102 (25%)
V-set 204..290 CDD:284989 24/106 (23%)
vsig10NP_001093564.2 IG_like 28..116 CDD:214653 24/100 (24%)
Ig 32..104 CDD:299845 21/84 (25%)
IG_like 140..204 CDD:214653 13/66 (20%)
IGc2 143..203 CDD:197706 12/62 (19%)
IG_like 324..404 CDD:214653 20/95 (21%)
Ig 328..404 CDD:299845 18/82 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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