DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr17 and Negr1

DIOPT Version :10

Sequence 1:NP_731670.1 Gene:dpr17 / 41470 FlyBaseID:FBgn0051361 Length:664 Species:Drosophila melanogaster
Sequence 2:XP_063138498.1 Gene:Negr1 / 59318 RGDID:708416 Length:423 Species:Rattus norvegicus


Alignment Length:355 Identity:67/355 - (18%)
Similarity:117/355 - (32%) Gaps:137/355 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   414 NITAQMGNHAYMPCQIHRLSDKPVSWVRMRDNHIISVDETTFIADERFQSIYQEDHDYTWSLQIK 478
            |:..:.|:.|.:.|.:...:.|. :|  :..:.||......:..|.|.........||  ||||:
  Rat    41 NMLVRKGDTAVLRCYLEDGASKG-AW--LNRSSIIFAGGDKWSVDPRVSISTLNKRDY--SLQIQ 100

  Fly   479 YVEPSDAGWYECQMATE--PKLSAKVHLQI-VKPKT-ELIGDQSRFVKAGSKVALHCIVRG---- 535
            .|:.:|.|.|.|.:.|:  |: :.:|||.: |.||. ::..|.:  :..|:.|.|.|:..|    
  Rat   101 NVDVTDDGPYTCSVQTQHTPR-TMQVHLTVQVPPKIYDISNDMT--INEGTNVTLTCLATGKPEP 162

  Fly   536 -------------------------TLD------------------------------------- 538
                                     |.|                                     
  Rat   163 AISWRHISPSAKPFENGQYLDIYGITRDQAGEYECSAENDVSFPDVKKVRVVVNFAPTIQEIKSG 227

  Fly   539 -----------------PPKYIIWFRGQKKISDSDERTGWYTQLDRNIFGTVGDNQNTIGSLIIP 586
                             ||....|::|:|::.:..:             |.:..|.:|...|.:.
  Rat   228 TVTPGRSGLIRCEGAGVPPPAFEWYKGEKRLFNGQQ-------------GIIIQNFSTRSILTVT 279

  Fly   587 LVRKEDSGNYTCQPSN---SVSVSVDLHVL-----------SGEY---------------SASAI 622
            .|.:|..|||||..:|   :.:.|:.|:.:           .|:|               ..||:
  Rat   280 NVTQEHFGNYTCVAANKLGTTNASLPLNQIIEPTTSSPVTSPGQYPHTFTKYVWVLFLSSKISAL 344

  Fly   623 MSTAARTTKGGRSTCHSTLGLLGILGLLWA 652
            ....::...|.|..|.|.:..|..|.::|:
  Rat   345 SQKHSQLLLGHRHGCGSGVCHLSCLSVMWS 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr17NP_731670.1 V-set 415..507 CDD:462230 25/94 (27%)
IG_like 521..612 CDD:214653 26/176 (15%)
Ig strand B 527..531 CDD:409353 2/3 (67%)
Ig strand C 542..546 CDD:409353 0/3 (0%)
Ig strand E 581..585 CDD:409353 1/3 (33%)
Ig strand F 595..600 CDD:409353 4/4 (100%)
Negr1XP_063138498.1 None

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