DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr17 and igsf9bb

DIOPT Version :9

Sequence 1:NP_001287297.1 Gene:dpr17 / 41470 FlyBaseID:FBgn0051361 Length:664 Species:Drosophila melanogaster
Sequence 2:XP_009293693.1 Gene:igsf9bb / 569554 ZFINID:ZDB-GENE-091112-15 Length:1439 Species:Danio rerio


Alignment Length:308 Identity:74/308 - (24%)
Similarity:110/308 - (35%) Gaps:114/308 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   415 ITAQMGNHAYMPCQ-IHRLSDKP--VSWVRMRDNHIISVDETTFIADERFQSIYQEDHDYTW--- 473
            :|::.|....:.|. :|.|:.:|  |.|.:..    :.:   .|..:.||...: .|.:|..   
Zfish    33 VTSRAGETVILGCDVVHPLNGQPYVVEWFKFG----VPI---PFFINFRFYPPH-VDPEYAGRAS 89

  Fly   474 -----SLQIKYVEPSDAGWYECQ-MATEPKL-----SAKVHLQIVKPKTELIGDQSRFVKA--GS 525
                 ||:|:.|...|.|||||: :..|.:.     .:.|||.:..|.| ......::|:|  |.
Zfish    90 LHGKSSLRIERVRSEDQGWYECKV
LMLEQQYHTFHNGSWVHLTVNAPPT-FTDTPPQYVEAKEGG 153

  Fly   526 KVALHCIVRGTLDPPKYIIWFR--------GQKKISD--------SDERTGWYT----------- 563
            .:.|.|...|  :|...:.|.|        .:.|:||        |.|..|.||           
Zfish   154 SITLSCTAFG--NPKPSVSWLREGNPVQDSTKYKVSDGSLTLVSISREDRGAYTCRAYSEQGEAV 216

  Fly   564 ----------------------QLDRNIFGTV----------------GDN---QNTI------- 580
                                  .:.::.|.|.                .||   :|.:       
Zfish   217 HTTRLLVQGPPFIVSPPENITVNISQDAFFTCQAEAYPGNLTYTWFWEEDNVFFKNDLKRRVSIL 281

  Fly   581 --GSLIIPLVRKEDSGNYTCQPSNSV----SVSVDLHVLSGEYSASAI 622
              |||||..|:.||:|.|||.||||:    |.|..|.|   .|.|..|
Zfish   282 IDGSLIISQVKPEDAGKYTCSPSNSLGRPPSASAYLTV---HYPARVI 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr17NP_001287297.1 IG_like 414..491 CDD:214653 22/86 (26%)
Ig 415..507 CDD:299845 27/108 (25%)
IG_like 521..612 CDD:214653 41/173 (24%)
IGc2 524..605 CDD:197706 36/161 (22%)
igsf9bbXP_009293693.1 IG_like 30..113 CDD:214653 23/87 (26%)
Ig 41..113 CDD:143165 21/79 (27%)
IG_like 144..223 CDD:214653 17/80 (21%)
IGc2 151..208 CDD:197706 15/58 (26%)
I-set 227..319 CDD:254352 24/91 (26%)
Ig <263..319 CDD:299845 22/55 (40%)
Ig_2 326..414 CDD:290606 1/1 (100%)
IG_like 329..403 CDD:214653
IG_like 424..504 CDD:214653
Ig 440..504 CDD:299845
FN3 509..604 CDD:238020
FN3 620..704 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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