DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr17 and nitr12

DIOPT Version :9

Sequence 1:NP_001287297.1 Gene:dpr17 / 41470 FlyBaseID:FBgn0051361 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_001020667.1 Gene:nitr12 / 557932 ZFINID:ZDB-GENE-041001-1 Length:318 Species:Danio rerio


Alignment Length:213 Identity:45/213 - (21%)
Similarity:65/213 - (30%) Gaps:95/213 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   433 SDKPVSWVRMRDNHIISV--DETTFIADERFQSIYQEDHDYTWSLQIKYVEPSDAGWYEC----- 490
            |..||.:...::||.:||  ::.||:                  |.||..:|||||.|.|     
Zfish    70 SSTPVFYGEFKNNHRMSVQKEKNTFV------------------LNIKEAKPSDAGIYYCGARDY 116

  Fly   491 ------------------------QMATEPKLSAKVHLQIVKPKTELIGDQSRFVKAGSKVALHC 531
                                    |..:.|.|..: |.....|              |..|.|||
Zfish   117 DLITFSNG
LFLNYKDASTKQHHIKQFLSGPNLGTE-HEPEFNP--------------GDSVNLHC 166

  Fly   532 -IVRGTLDPPKYIIWFRGQKKISDSDERTGWYTQLDRNIFGTVGDNQNT-----------IGSLI 584
             ::....:....|.|||  .:..|:..             |.:..:.||           :.|.|
Zfish   167 SVLTERCEENHTIYWFR--HEFGDAHP-------------GLIYKDGNTTDQCEKRSEKDVQSCI 216

  Fly   585 IPLVRKE----DSGNYTC 598
            ..|.:|.    |:|.|.|
Zfish   217 YNLPKKNLNLTDAGVYYC 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr17NP_001287297.1 IG_like 414..491 CDD:214653 19/88 (22%)
Ig 415..507 CDD:299845 23/104 (22%)
IG_like 521..612 CDD:214653 21/94 (22%)
IGc2 524..605 CDD:197706 21/91 (23%)
nitr12NP_001020667.1 IgV 28..124 CDD:143167 19/71 (27%)
IG_like 30..123 CDD:214653 19/70 (27%)
V-set 150..253 CDD:284989 23/115 (20%)
IG_like 155..236 CDD:214653 22/109 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1457433at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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