DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr17 and dscamb

DIOPT Version :9

Sequence 1:NP_001287297.1 Gene:dpr17 / 41470 FlyBaseID:FBgn0051361 Length:664 Species:Drosophila melanogaster
Sequence 2:XP_009289749.1 Gene:dscamb / 386937 ZFINID:ZDB-GENE-031118-67 Length:2020 Species:Danio rerio


Alignment Length:288 Identity:69/288 - (23%)
Similarity:114/288 - (39%) Gaps:70/288 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   380 RQMFNEQH--SYL-AAH---RDGG-------DGAGSA---VRRNL-----TMPVLNITAQMGNHA 423
            |.:..|.|  ||| .:|   .|||       :.|||.   .|.|:     ..|:.|:||..|...
Zfish   457 RIITTEGHVLSYLNVSHTQVSDGGVYRCTCNNSAGSVSYQARINVRGPASIRPMKNVTAIAGRDT 521

  Fly   424 YMPCQIHRLSDKPVSWVRMRDNHIISVDETTFIADERFQSIYQEDHDYTWSLQIKYVEPSDAGWY 488
            |:.|:|.......:.|  .:|::::..:..            |...:...:|::..|:.||.|.|
Zfish   522 YIHCRIIGYPYYSIKW--YKDSNLLPFNHR------------QRAFENNGTLKLSNVQNSDEGEY 572

  Fly   489 ECQMATEP--KLSAKVHLQI-VKPKTELIGDQSRFVKAGSKVALHCIVRGTLDPPKYIIWFRGQK 550
            .|.:..:|  ::...||:.: |.|..:....||..:  |.:|.:.|:|... |.|..|.|.:..:
Zfish   573 TCYVLVDPEKQIHRSVHVTVKVPPLIQHSDSQSASI--GQRVFIPCVVISG-DLPMSITWHKDGR 634

  Fly   551 KISDSDERTGWYTQLDRNIFGTVGDNQNTIGSLIIPLVRKEDSGNYTCQPSN---SVSVSVDLHV 612
            .|:.|              .|...||.:...||.|..:.:..:|:|||...|   :|..|:.|.|
Zfish   635 PINAS--------------LGVTIDNIDFTSSLRISNLSEIHNGSYTCIARNEAAAVEHSIQLIV 685

  Fly   613 ------------LSGEYSASAIMSTAAR 628
                        ..|.|..|..::.:|:
Zfish   686 KVPPHFEVQPKDQDGIYGKSVTLNCSAK 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr17NP_001287297.1 IG_like 414..491 CDD:214653 16/76 (21%)
Ig 415..507 CDD:299845 19/94 (20%)
IG_like 521..612 CDD:214653 24/93 (26%)
IGc2 524..605 CDD:197706 21/83 (25%)
dscambXP_009289749.1 I-set 132..198 CDD:254352
I-set 225..310 CDD:254352
IGc2 239..300 CDD:197706
IG_like 320..400 CDD:214653
IGc2 328..391 CDD:197706
IG_like 417..501 CDD:214653 14/43 (33%)
Ig 424..498 CDD:143165 13/40 (33%)
IG_like 511..592 CDD:214653 20/94 (21%)
IGc2 518..576 CDD:197706 14/71 (20%)
I-set 595..685 CDD:254352 27/106 (25%)
Ig 612..682 CDD:143165 22/84 (26%)
I-set 689..785 CDD:254352 4/25 (16%)
Ig7_DSCAM 706..785 CDD:143211 1/8 (13%)
IG_like 795..883 CDD:214653
Ig 803..890 CDD:299845
FN3 887..980 CDD:238020
FN3 987..1084 CDD:238020
FN3 1092..1185 CDD:238020
FN3 1190..1279 CDD:238020
IGc2 1302..1367 CDD:197706
FN3 1398..1471 CDD:238020
FN3 1485..1557 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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