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Protein Alignment dpr17 and Ncam2

DIOPT Version :9

Sequence 1:	NP_001287297.1	Gene:	dpr17 / 41470	FlyBaseID:	FBgn0051361	Length:	664	Species:	Drosophila melanogaster
Sequence 2:	NP_981954.2	Gene:	Ncam2 / 288280	RGDID:	1303131	Length:	837	Species:	Rattus norvegicus

Alignment Length:	271	Identity:	61/271 - (22%)
Similarity:	101/271 - (37%)	Gaps:	76/271 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly   360 QAAAAKTSSEAVTMSPEEQRRQMFNEQHSYLAAHRDGGDGAGSAVRRNLTMPVLNITA-QMGNHA 423
            ||..||..::..|:..|..::..|.|                          ||:... :.|..|
  Rat    94 QATDAKGQTQEATVVLEIYQKLTFRE--------------------------VLSPQEFKQGEDA 132

  Fly   424 YMPCQIHRLSDKPVSWVRMRDNHIISVDETTFIADERFQSIYQEDHDYTWSLQIKYVEPSDAGWY 488
            .:.|::.......|||       :...:|.|.|.|.||..:...      :|||..:..||.|.|
  Rat   133 EVVCRVSSSPAPAVSW-------LYHNEEVTTIPDNRFAVLANN------NLQILNINKSDEGIY 184

  Fly   489 ECQMATEPK--LSAKVHLQIVKPKTELIGDQSRF---VKAGSKVALHCIVRGTLDPPKYIIWFRG 548
            .|:...|.:  :..:..:.||.....::..|..|   .:.|.::.|.|...|:.||.  |.|||.
  Rat   185 RCEGRVEARGEIDFRDIIVIVNVPPAIVMPQKSFNATAERGEEMTLTCKASGSPDPA--ISWFRN 247

  Fly   549 QKKISDSDE--RTGWYTQLDRNIFGTVGDNQNTIGSLIIPLVRKEDSGNYTCQPSNS-------- 603
            .|.|.::::  ..|..|:|             |:.::|     .:|.|:|.|:.:|.
  Rat   248 GKLIEENEKYILKGSNTEL-------------TVRNII-----NKDGGSYVCKATNKAGEDQKQA 294

  Fly   604 -VSVSVDLHVL 613
             :.|.|..|:|
  Rat   295 FLQVFVQPHIL 305

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.