DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr17 and Lrit1

DIOPT Version :9

Sequence 1:NP_001287297.1 Gene:dpr17 / 41470 FlyBaseID:FBgn0051361 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_647547.2 Gene:Lrit1 / 246214 RGDID:628607 Length:623 Species:Rattus norvegicus


Alignment Length:273 Identity:58/273 - (21%)
Similarity:91/273 - (33%) Gaps:94/273 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   428 QIHRLSDKPV-SWVRM---------RDNHIISVDETTFIADER-FQSIYQEDHDYTWSLQIKYVE 481
            |:.||.::.: :|..:         |...::.:.:..::.|.| :..::..|   .|:..:.::|
  Rat   166 QLMRLPEELLDTWAHLKTGPYLSSRRTRLVLGLQDNPWVCDCRLYDLVHLLD---GWASNLIFIE 227

  Fly   482 P--------SDAG----WYECQMATEPKLSAKVHLQIVKPKTELIGDQSRFVKAGSKVALHCIVR 534
            .        |.||    ..|.:....|:|...| ..|:.|             .||.|.|.|...
  Rat   228 ARLRCGSPRSLAG
VAFSQLELRKCQSPELRPGV-TSIISP-------------LGSTVLLRCGAT 278

  Fly   535 GTLDPPKYIIWFRGQKKISDSDERTGWYTQLDRNIFGTVGDNQNTIGS----LIIPLVRKEDSGN 595
            |...|                  ...|.....|.:.|||....::.||    |.:|:|...|||:
  Rat   279 GIPGP------------------EMSWRRANGRPLNGTVHQEVSSDGSSWTLLDLPVVSLFDSGD 325

  Fly   596 YTCQPSNSVSVSVDLHVLSGEYSASAIMSTAARTTKGGRSTCHSTLGLLGILGLLWAMQG----- 655
            |.||..|.:..|        |...|.|::....:|:           ..||.|.|||..|     
  Rat   326 YICQAKNFLGAS--------ETLISLIVTEPQTSTE-----------YTGIPGALWARTGEGAEA 371

  Fly   656 --------AMHTP 660
                    |.|.|
  Rat   372 AAYNNKLVARHVP 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr17NP_001287297.1 IG_like 414..491 CDD:214653 14/85 (16%)
Ig 415..507 CDD:299845 17/101 (17%)
IG_like 521..612 CDD:214653 25/94 (27%)
IGc2 524..605 CDD:197706 24/84 (29%)
Lrit1NP_647547.2 LRRNT 23..61 CDD:214470
LRR 1 60..81
LRR_8 63..143 CDD:290566
leucine-rich repeat 64..84 CDD:275378
LRR 2 84..105
leucine-rich repeat 85..132 CDD:275378
LRR 3 108..128
LRR_8 131..>176 CDD:290566 3/9 (33%)
LRR_4 131..172 CDD:289563 3/5 (60%)
LRR 4 132..153
leucine-rich repeat 133..156 CDD:275378
LRR 5 156..177 3/10 (30%)
leucine-rich repeat 157..180 CDD:275378 4/13 (31%)
leucine-rich repeat 181..205 CDD:275378 1/23 (4%)
TPKR_C2 201..>240 CDD:301599 6/41 (15%)
Ig 257..345 CDD:299845 30/127 (24%)
IG_like 267..345 CDD:214653 27/103 (26%)
FN3 431..501 CDD:214495
LRR 6 525..548
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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