DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr17 and Lrit3

DIOPT Version :9

Sequence 1:NP_001287297.1 Gene:dpr17 / 41470 FlyBaseID:FBgn0051361 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_001274153.1 Gene:Lrit3 / 242235 MGIID:2685267 Length:681 Species:Mus musculus


Alignment Length:347 Identity:67/347 - (19%)
Similarity:115/347 - (33%) Gaps:89/347 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 LPPFPVFAAADLPAYRAA----ADAAEAAKLAAEAAAQAAAAKTSSEAVTMSPEEQRRQMFNEQH 387
            |..||..:..|:|..|..    ...|.....|............||..:|..|.:     |.:..
Mouse   117 LTAFPWVSLLDMPHLRTLDLHNNRIASVPNEAVRYLRNLTCLDLSSNRLTTLPPD-----FLDSW 176

  Fly   388 SYLAAHRDGGDGAGSAVRRNLTMPVLNITAQMGNHAYMPCQIHRLSDKPVSWVRMRDNHIISVDE 452
            |:||.          ...|:...|...|...:.::.:. |..|  ..|.:...::.|:.::.:|.
Mouse   177 SHLAV----------TPSRSPDFPPRRIILGLQDNPWF-CDCH--ISKVIELSKVTDHAVVLLDP 228

  Fly   453 TTFIAD-ERFQSIYQEDHDYTWSLQIKYVEPSDAGWYECQMATEPKLSAKVHLQIVKPKTELIGD 516
            ....:: ||||.|..:                       ::..|..|...|.:...|..:.|   
Mouse   229 LMVCSEPERFQGILFQ-----------------------RVELEKCLKPSVMMSATKITSAL--- 267

  Fly   517 QSRFVKAGSKVALHCIVRGTLDPPKYIIWFRGQKKISDSDERTGWYTQLDRNIFGTVGDNQNTIG 581
                   ||.|.|.|..:|  .|...:.|.|       ||..|..||.:..:      ..:....
Mouse   268 -------GSNVLLRCDAKG--HPTPQLTWTR-------SDGSTVNYTVIQES------PGEGIRW 310

  Fly   582 SLI-IPLVRKEDSGNYTCQPSNSVSVS---VDLHVLSGEYSASAIMSTAARTTKGGRSTCHSTLG 642
            |:| :..:..:|:|:|.|:..|...:|   |.:.|:.|  ..:.:...::..:.|.....|...|
Mouse   311 SIISLTSISHKDAGDYRCKAKNLAGISEAVVTVTVVGG--VTTTLSPDSSERSPGEPPEQHPQPG 373

  Fly   643 LLGILGLLWAMQGAMHTPPTQT 664
            |.|            .|||:::
Mouse   374 LGG------------STPPSKS 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr17NP_001287297.1 IG_like 414..491 CDD:214653 11/77 (14%)
Ig 415..507 CDD:299845 14/92 (15%)
IG_like 521..612 CDD:214653 23/94 (24%)
IGc2 524..605 CDD:197706 21/81 (26%)
Lrit3NP_001274153.1 LRR 1. /evidence=ECO:0000255 56..79
LRR_8 61..117 CDD:290566 67/347 (19%)
LRR 2. /evidence=ECO:0000255 80..103
leucine-rich repeat 83..106 CDD:275378
LRR 3. /evidence=ECO:0000255 104..128 3/10 (30%)
LRR_8 105..165 CDD:290566 10/47 (21%)
LRR_4 106..146 CDD:289563 7/28 (25%)
leucine-rich repeat 107..130 CDD:275378 4/12 (33%)
LRR_4 129..170 CDD:289563 7/40 (18%)
LRR 4. /evidence=ECO:0000255 129..151 4/21 (19%)
leucine-rich repeat 131..154 CDD:275378 3/22 (14%)
LRR 5. /evidence=ECO:0000255 152..175 5/27 (19%)
leucine-rich repeat 155..168 CDD:275378 3/12 (25%)
Ig 254..335 CDD:299845 24/105 (23%)
IG_like 263..339 CDD:214653 23/100 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 350..391 8/46 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 425..464
FN3 489..563 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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