DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr17 and Ptprq

DIOPT Version :9

Sequence 1:NP_001287297.1 Gene:dpr17 / 41470 FlyBaseID:FBgn0051361 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_001357916.1 Gene:Ptprq / 237523 MGIID:1096349 Length:2301 Species:Mus musculus


Alignment Length:736 Identity:142/736 - (19%)
Similarity:225/736 - (30%) Gaps:250/736 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ERTKGAVSVIA--ARNWATGTATQDWSQKSSSSWSSTSRRTGISRTRTRPATLTTEMTVAGRAER 76
            |....||..||  ||:|          |..|..|....:..||        .:...:||.|.:.:
Mouse  1339 ESVPDAVQNIACVARDW----------QSVSVMWDPPRKANGI--------IIHYMITVEGNSTK 1385

  Fly    77 AGVGAPWCRRFFHTSPLASWLRISFVLLVLPALGFGIQVVTCSNPELGASAPDPVDLTWGGKNTE 141
            .....|   .:..|..||:   .|::.                  |:.||       |..|:..|
Mouse  1386 VSPRDP---MYTFTKLLAN---TSYIF------------------EVRAS-------TSAGEGNE 1419

  Fly   142 GQLTTAT-RSTLPDSPMTT------------------------QNDLITTASNLATAK--KPATA 179
            .|...:| ..|:|..|..|                        ||..|||.......:  :|...
Mouse  1420 SQCNVSTLPETVPSVPTNTAFSNVQSTSVTLRWIKPDTILGYFQNYKITTQLRAQKCREWEPEEC 1484

  Fly   180 ASEAVV-------DTAETA-----------ETAPPTEA----TSSWSSTAVARGMSSADGAGEAI 222
            .....|       .|.:|.           :.|..|.|    .|||.||....|  ..||..|.:
Mouse  1485 VEHQEVQYLYEANQTEDTVRGLKKFQWYRFQVAASTNAGYGNASSWISTQTLPG--PPDGPPENV 1547

  Fly   223 ATSQSAQIGLTTQ---------------------------ATVRQTEAQTASTATQAAAAT--SA 258
            ....::..|:...                           :.|:..|....:........|  |.
Mouse  1548 RVVATSPFGINISWNEPAIITGPTFYLIDVKSVDNDNFNISFVKSNEENKTTEINDLEVFTRYSV 1612

  Fly   259 ATSAAIASAAAA---TETAAEMLISTIYPASTETDLHNSIERVEGQRGKMANAFHPGVPDSLTKG 320
            ..:|.:.:.:.|   .:::||::|:|:  .|...|..|             |.....:||.:|| 
Mouse  1613 VITAFVGNVSGAYTDGKSSAEVIITTL--ESVPKDPPN-------------NMTFQKIPDEVTK- 1661

  Fly   321 FSIPTFLPP------FPVFAAADLPAYRAAADAAEAAKLAAEAAAQAAAAKTSSEAVTMSPEEQR 379
            |.: :||||      ..|:.|.   .||      |....|.:....:...||.:..:.|      
Mouse  1662 FQL-SFLPPSQPNGNIQVYQAL---VYR------EDDPTAVQIHNLSIIQKTDTSVIAM------ 1710

  Fly   380 RQMFNEQHSY-LAAHRDGGDGAGSAVRRNLTMPVLNITAQMGNHAYMPCQIHRLSDKPVSWVRMR 443
            .:.....|:| ::.:.....|||..|:..:||.:    .........|..||..:.|        
Mouse  1711 LEGLKGGHTYNISVYAINSAGAGPKVQMRITMDI----KAPARPKTKPIPIHDATGK-------- 1763

  Fly   444 DNHIISVDETTFIADERFQSIYQEDHDYTWSLQIKYVEPSDAG---------WYECQM-ATEPKL 498
                :.|..|| |........|.:||....::|:...|   ||         ||:... ...|..
Mouse  1764 ----LLVTSTT-ITIRMPICYYNDDHGPIRNVQVLVAE---AGAQQDGNVTKWYDAYFNKARPYF 1820

  Fly   499 SAK--VHLQIVKPKTELIGDQSRFVKAGSKVAL-----HCIVRGTLDPPK-YIIWFRGQKKISDS 555
            :.:  .:...::.||:..|::..:|.......:     ..|..|.|.|.| |:..||.       
Mouse  1821 TNEGFPNPPCIEGKTKFSGNEEIYVIGADNACMIPGNEEKICNGPLKPKKQYLFKFRA------- 1878

  Fly   556 DERTGWYTQLDRNIFGTVGDNQ-----NTIGSLIIPLVRKEDSGNYTCQPSNSVSVSVDLHVLSG 615
                       .|:.|...|::     .|:|         |.....|.:    :.:||.|.:||.
Mouse  1879 -----------TNVMGQFTDSEYSDPIKTLG---------EGLSERTVE----IILSVTLCILSI 1919

  Fly   616 EYSASAIMSTA---ARTTKGG 633
            ....:||.:.|   .:..:||
Mouse  1920 ILLGTAIFAFARIRQKQKEGG 1940

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr17NP_001287297.1 IG_like 414..491 CDD:214653 17/85 (20%)
Ig 415..507 CDD:299845 18/103 (17%)
IG_like 521..612 CDD:214653 19/101 (19%)
IGc2 524..605 CDD:197706 15/91 (16%)
PtprqNP_001357916.1 FN3 57..151 CDD:238020
FN3 308..393 CDD:238020
fn3 399..>441 CDD:365830
FN3 570..654 CDD:238020
fn3 668..744 CDD:365830
FN3 762..850 CDD:238020
fn3 857..934 CDD:365830
FN3 951..1049 CDD:238020
FN3 1056..1137 CDD:238020
FN3 1152..1233 CDD:238020
FN3 1247..1337 CDD:238020
FN3 1342..1421 CDD:238020 26/127 (20%)
FN3 1432..1535 CDD:238020 20/102 (20%)
FN3 1542..1638 CDD:238020 12/95 (13%)
FN3 1645..1734 CDD:238020 25/118 (21%)
UP_III_II 1759..1928 CDD:297589 41/215 (19%)
R-PTPc-Q 2033..2256 CDD:350464
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.