DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr17 and Ntm

DIOPT Version :9

Sequence 1:NP_001287297.1 Gene:dpr17 / 41470 FlyBaseID:FBgn0051361 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_001344522.1 Gene:Ntm / 235106 MGIID:2446259 Length:367 Species:Mus musculus


Alignment Length:321 Identity:71/321 - (22%)
Similarity:118/321 - (36%) Gaps:89/321 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   414 NITAQMGNHAYMPCQIHRLSDKPVSWVRMRDNHIISVDETTFIADERFQSIYQEDHDYTWSLQIK 478
            |:|.:.|..|.:.|.|.....: |:|  :..:.|:......:..|.|...:......|  |::|:
Mouse    44 NVTVRQGESATLRCTIDNRVTR-VAW--LNRSTILYAGNDKWCLDPRVVLLSNTQTQY--SIEIQ 103

  Fly   479 YVEPSDAGWYECQMATE--PKLSAKVHLQI-VKPK-TELIGDQSRFVKAGSKVALHCIVRGTLDP 539
            .|:..|.|.|.|.:.|:  ||.| :|||.: |.|| .|:..|.|  :..|:.::|.||..|..:|
Mouse   104 NVDVYDEGPYTCSVQTDNHPKTS-RVHLIVQVSPKIVEISSDIS--INEGNNISLTCIATGRPEP 165

  Fly   540 --------PKYIIWF---------------RGQKKISDSDE-----------------------R 558
                    ||.:.:.               .|:.:.|.|::                       .
Mouse   166 TVTWRHISPKAVGFVSEDEYLEIQGITREQSGEYECSASNDVAAPVVRRVKVTVNYPPYISEAKG 230

  Fly   559 TG----------------------WYTQLDRNIFGTVG---DNQNTIGSLIIPLVRKEDSGNYTC 598
            ||                      |:....|.:.|..|   :|:..:..|....|.:.|.|||||
Mouse   231 TGVPVGQKGTLQCEASAVPSAEFQWFKDDKRLVEGKKGVKVENRPFLSKLTFFNVSEHDYGNYTC 295

  Fly   599 QPSNSV---SVSVDLHVLSGEYSAS---AIMSTAARTTKGGRSTCHSTLGLLGILGLLWAM 653
            ..||.:   :.|:.|..|:...|::   .:.:||....||..:......|.....|.:|.:
Mouse   296 VASNKLGHTNASIMLFELNEPTSSTLLQEVKTTALTPWKGPGAVSEVNNGTSRRAGCIWLL 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr17NP_001287297.1 IG_like 414..491 CDD:214653 18/76 (24%)
Ig 415..507 CDD:299845 25/94 (27%)
IG_like 521..612 CDD:214653 30/164 (18%)
IGc2 524..605 CDD:197706 28/154 (18%)
NtmNP_001344522.1 Ig 44..132 CDD:416386 26/93 (28%)
Ig strand A' 44..49 CDD:409353 2/4 (50%)
Ig strand B 51..59 CDD:409353 2/7 (29%)
CDR1 59..63 CDD:409353 1/3 (33%)
FR2 64..70 CDD:409353 2/8 (25%)
Ig strand C 64..70 CDD:409353 2/8 (25%)
CDR2 71..83 CDD:409353 1/11 (9%)
Ig strand C' 72..76 CDD:409353 1/3 (33%)
Ig strand C' 80..83 CDD:409353 0/2 (0%)
FR3 84..118 CDD:409353 10/35 (29%)
Ig strand D 87..94 CDD:409353 1/6 (17%)
Ig strand E 97..103 CDD:409353 2/7 (29%)
Ig strand F 110..118 CDD:409353 3/7 (43%)
CDR3 119..123 CDD:409353 1/3 (33%)
Ig strand G 123..132 CDD:409353 6/9 (67%)
FR4 125..132 CDD:409353 4/7 (57%)
Ig_3 136..205 CDD:404760 15/70 (21%)
Ig strand A' 144..148 CDD:409353 2/5 (40%)
Ig strand B 151..160 CDD:409353 3/8 (38%)
Ig strand F 197..205 CDD:409353 2/7 (29%)
Ig_3 222..299 CDD:404760 15/76 (20%)
putative Ig strand A 223..229 CDD:409353 0/5 (0%)
Ig strand B 239..243 CDD:409353 0/3 (0%)
Ig strand C 252..256 CDD:409353 0/3 (0%)
Ig strand E 278..282 CDD:409353 1/3 (33%)
Ig strand F 292..297 CDD:409353 4/4 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I12107
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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