DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr17 and DSCAM

DIOPT Version :9

Sequence 1:NP_001287297.1 Gene:dpr17 / 41470 FlyBaseID:FBgn0051361 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_001380.2 Gene:DSCAM / 1826 HGNCID:3039 Length:2012 Species:Homo sapiens


Alignment Length:330 Identity:74/330 - (22%)
Similarity:106/330 - (32%) Gaps:129/330 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   388 SYL----AAHRDGG-------DGAGSAV---RRNL-----TMPVLNITAQMGNHAYMPCQIHRLS 433
            |||    :..||||       :.||..:   |.|:     ..|:.||||..|...|:.|::....
Human   467 SYLNISSSQVRDGGVYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYP 531

  Fly   434 DKPVSWVRMRD----NHIISVDETTFIADERFQSIYQEDHDYTWSLQIKYVEPS-DAGWYECQMA 493
            ...:.|.:..:    ||                  .|...:...:|::..|:.. |.|.|.|.:.
Human   532 YYSIKWYKNSNLLPFNH------------------RQVAFENNGTLKLSDVQKEVDEGEYTCNVL 578

  Fly   494 TEPKLSA--KVHLQIVKPKTELIGDQSRFVKAGSKVALHCIVRGTLDPPKYIIW----------- 545
            .:|:||.  .||:.:..|......:..|| ..|.:|.:.|:|... |.|..|.|           
Human   579 VQPQLSTSQSVHVTVKVPPFIQPFEFPRF-SIGQRVFIPCVVVSG-DLPITITWQKDGRPIPGSL 641

  Fly   546 --------FRGQKKISD-SDERTGWYTQLDRN----------------------------IFGTV 573
                    |....:||: |....|.||.:.||                            |:|..
Human   642 GVTIDNIDFTSSLRISNLSLMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKA 706

  Fly   574 --------GDNQNTI---------------------------GSLIIPLVRKEDSGNYTCQPSNS 603
                    |....||                           |||:|..|.:||||.|.|:.||.
Human   707 VILNCSAEGYPVPTIVWKFSKGAGVPQFQPIALNGRIQVLSNGSLLIKHVVEEDSGYYLCKVSND 771

  Fly   604 VSVSV 608
            |...|
Human   772 VGADV 776

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr17NP_001287297.1 IG_like 414..491 CDD:214653 16/81 (20%)
Ig 415..507 CDD:299845 21/98 (21%)
IG_like 521..612 CDD:214653 37/171 (22%)
IGc2 524..605 CDD:197706 35/163 (21%)
DSCAMNP_001380.2 Ig 45..113 CDD:319273
I-set 235..310 CDD:254352
I-set 315..385 CDD:333254
Ig_3 407..488 CDD:316449 7/20 (35%)
IGc2 518..575 CDD:197706 12/74 (16%)
I-set 596..686 CDD:333254 20/91 (22%)
Ig_DSCAM 707..784 CDD:143211 18/70 (26%)
Ig 802..889 CDD:325142
FN3 885..978 CDD:238020
FN3 986..1083 CDD:238020
FN3 1091..1184 CDD:238020
FN3 1189..1278 CDD:238020
Ig 1303..1369 CDD:319273
FN3 1380..1470 CDD:238020
FN3 1486..1555 CDD:238020
Required for netrin-mediated axon repulsion of neuronal growth cones. /evidence=ECO:0000250|UniProtKB:Q9ERC8 1617..2012
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1718..1810
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1855..1883
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1971..2012
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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