DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr17 and Ncam1

DIOPT Version :9

Sequence 1:NP_001287297.1 Gene:dpr17 / 41470 FlyBaseID:FBgn0051361 Length:664 Species:Drosophila melanogaster
Sequence 2:XP_006510118.1 Gene:Ncam1 / 17967 MGIID:97281 Length:1162 Species:Mus musculus


Alignment Length:431 Identity:93/431 - (21%)
Similarity:145/431 - (33%) Gaps:131/431 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 ISRTRTRPATLTTEMTVAGRAERAGVGAPWCRRFFHTSPLASWLRISFVLLVLP----------- 107
            :.||..:|..:.     |..:..||:.         |..:...|.:.||||::.           
Mouse   736 VFRTSAQPTAIP-----ANGSPTAGLS---------TGAIVGILIVIFVLLLVVMDITCYFLNKC 786

  Fly   108 ALGFGIQVVTCSNPELGASAPD---------------PV-------------DLTWGGKNTE-GQ 143
            .|...|.|..|.....||...|               |:             |   |||:|| .:
Mouse   787 GLLMCIAVNLCGKAGPGAKGKDMEEGKAAFSKDESKEPIVEVRTEEERTPNHD---GGKHTEPNE 848

  Fly   144 LTTATRSTLPDSPMTTQNDLITTASNLATAKKPATAASEAVVDTAETAETAPPTEATSSWSSTA- 207
            .|..|...||.....|..|::.:.:.:       |..|:.:.:|..||:.:|.:|.|:..||.| 
Mouse   849 TTPLTEPELPADTTATVEDMLPSVTTV-------TTNSDTITETFATAQNSPTSETTTLTSSIAP 906

  Fly   208 -----------------VARGM---SSADGAGEAIA-------TSQSAQIGLTTQATVRQTEAQT 245
                             .::|:   ||:..:...:|       |..||.......:||...:...
Mouse   907 PATTVPDSNSVPAGQATPSKGVTASSSSPASAPKVAPLVDLSDTPTSAPSASNLSSTVLANQGAV 971

  Fly   246 ASTATQAAAATSAATSAAIASAAAATET---AAEMLISTIYPASTETDLHNSIERVEGQRGKMAN 307
            .|.:|.|:|..::....|..::.|.|.|   ||..|.:...||   ||...:.:.....:|....
Mouse   972 LSPSTPASAGETSKAPPASKASPAPTPTPAGAASPLAAVAAPA---TDAPQAKQEAPSTKGPDPE 1033

  Fly   308 AFHPGV----PDSLTK------------------------GFSIPTFLPPFPVFAA--ADLPAYR 342
            ...||.    |::.|.                        .|..|.......||||  :..||..
Mouse  1034 PTQPGTVKNPPEAATAPASPKSKAATTNPSQGEDLKMDEGNFKTPDIDLAKDVFAALGSPAPATG 1098

  Fly   343 AAADAAEAAKLAAEAAAQAAAAKTSS---EAVTMSPEEQRR 380
            |:..|:|.|...|::|...|.|||..   |..:..||.:.:
Mouse  1099 ASGQASELAPSTADSAVPPAPAKTEKGPVETKSEPPESEAK 1139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr17NP_001287297.1 IG_like 414..491 CDD:214653
Ig 415..507 CDD:299845
IG_like 521..612 CDD:214653
IGc2 524..605 CDD:197706
Ncam1XP_006510118.1 Ig1_NCAM-1 20..115 CDD:143273
IG 124..190 CDD:214652
Ig3_NCAM-1_like 211..308 CDD:143207
Ig_NCAM-1 307..413 CDD:143277
Ig_3 417..494 CDD:372822
FN3 509..606 CDD:238020
fn3 649..731 CDD:365830
PHA03247 <905..1140 CDD:223021 51/238 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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