DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr17 and Papln

DIOPT Version :9

Sequence 1:NP_001287297.1 Gene:dpr17 / 41470 FlyBaseID:FBgn0051361 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_001192272.1 Gene:Papln / 170721 MGIID:2386139 Length:1302 Species:Mus musculus


Alignment Length:386 Identity:80/386 - (20%)
Similarity:134/386 - (34%) Gaps:106/386 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 PGVPDSLTKGFSI------PTFLPPFP-----VFAAADLPA-----------------YRAAADA 347
            |.||.:.:..:.|      |:.:...|     :|...::|:                 |:..||.
Mouse   914 PAVPPTHSPSYRIRLAGSEPSLVQAAPGQAVQLFCPGNIPSEFQAGWQKEGRPISSNRYQLQADG 978

  Fly   348 A-EAAKLAAEAAA-------------QAAAAKTSSEAVTMSPEEQRRQMFNEQHSYLA---AHRD 395
            : ..::|..|.|.             |....:.:...:.:.||.|.|.....::..|.   .||.
Mouse   979 SLIISRLRPEDAGIYSCGSHRPGHEPQEIQLRVTGGDMAVFPEGQPRHFPEPRNPDLGHGPPHRG 1043

  Fly   396 GGDGAG-------------SAVRRNLTMPVLNITAQMGNHAYMPCQIHRLSDKPVSWVRMRDNHI 447
            .|..||             :.:|.:.|.|.: :.|..|....:.|:........:.|  .||..:
Mouse  1044 TGAEAGGHRVLSPSHPRPATRLRLDRTQPGV-VDASPGQRIRLTCRAEGFPVPTIEW--QRDGQL 1105

  Fly   448 ISVDETTFIADERFQSIYQEDHDYTWSLQIKYVEPSDAGWYEC-QMATEPKLSAKVHLQIVKPKT 511
            :|        ..|.|  .|.|    .||.|..|:..|.|:|.| ....:.:....|.|::::..|
Mouse  1106 VS--------SPRHQ--VQPD----GSLVISRVDVEDGGYYSCVAFNGQDRDQRWVQLRVLRELT 1156

  Fly   512 ELIGDQSRFVKAGSKVALHCIVRGTLDPPKYIIWFRGQKKISDSDERTGWYTQLDRNIFGTVGDN 576
            ......:..|..|....|.|:|.|   ....|.|.|....|.....|.                :
Mouse  1157 ITGLPPAVTVAEGDTARLLCVVAG---ESVNIRWSRNGLPIQADGHRV----------------H 1202

  Fly   577 QNTIGSLIIPLVRKEDSGNYTC---QPSNSVSVSVDLHVLSGEYSASAIMSTAARTTKGGR 634
            |:..|:|:|..:|..|.|:|||   :.|.:||.|.::.|        |:.:.||::...|:
Mouse  1203 QSPDGTLLIHNLRPRDEGSYTCSAFRGSQAVSRSTEVKV--------ALPAPAAQSRDLGK 1255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr17NP_001287297.1 IG_like 414..491 CDD:214653 19/77 (25%)
Ig 415..507 CDD:299845 21/92 (23%)
IG_like 521..612 CDD:214653 25/93 (27%)
IGc2 524..605 CDD:197706 21/83 (25%)
PaplnNP_001192272.1 TSP1 30..81 CDD:214559
ADAM_spacer1 184..299 CDD:368694
TSP1 309..362 CDD:214559
TSP1 389..447 CDD:214559
TSP1 447..504 CDD:214559
TSP1 511..562 CDD:214559
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..648
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 694..737
Kunitz_BPTI 771..822 CDD:333766
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 822..924 3/9 (33%)
Papilin_u7 831..922 CDD:374683 3/7 (43%)
Ig 932..>995 CDD:386229 10/62 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1024..1064 7/39 (18%)
I-set 1070..1141 CDD:369462 21/87 (24%)
Ig 1157..1241 CDD:386229 25/102 (25%)
PLAC 1257..1289 CDD:370061
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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