DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr17 and negr1

DIOPT Version :9

Sequence 1:NP_001287297.1 Gene:dpr17 / 41470 FlyBaseID:FBgn0051361 Length:664 Species:Drosophila melanogaster
Sequence 2:XP_031755650.1 Gene:negr1 / 100127726 XenbaseID:XB-GENE-987949 Length:388 Species:Xenopus tropicalis


Alignment Length:202 Identity:56/202 - (27%)
Similarity:89/202 - (44%) Gaps:48/202 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   414 NITAQMGNHAYMPCQIHRLSDKPVSWVRMRDNHII------SVDETTFIADERFQSIYQEDHDYT 472
            |:..:.|..|.:.|.:...:.|. :|:. |.:.|.      |||....||....|.         
 Frog    48 NLVVRQGETAMLRCFLEEGASKG-AWLN-RSSIIFAGGDKWSVDPRVSIATSSKQE--------- 101

  Fly   473 WSLQIKYVEPSDAGWYECQMATE--PKLSAKVHLQI-VKPKT-ELIGDQSRFVKAGSKVALHCIV 533
            :||:|:.|:.||.|.|.|.:.||  |: :.:|||.: |.||. ::..|.:  |..|:.|:|.|:.
 Frog   102 YSLRIQKVDVSDDGPYTCSVQTEHSPR-TLQVHLTVHVSPKIYDISSDMT--VNEGTNVSLICLA 163

  Fly   534 RGTLDPPKYIIWFRGQKKISDSDERTGWYTQLDRNIFGTVGDNQNTIGSLIIPLVRKEDSGNYTC 598
            .|..:|.  |.|    :.||.|.::.|....||  |:|                :.::.:|:|.|
 Frog   164 TGKPEPS--ISW----RHISPSAKQFGSGQYLD--IYG----------------ITRDQAGDYEC 204

  Fly   599 QPSNSVS 605
            ...|.||
 Frog   205 SAENDVS 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr17NP_001287297.1 IG_like 414..491 CDD:214653 22/82 (27%)
Ig 415..507 CDD:299845 28/100 (28%)
IG_like 521..612 CDD:214653 23/85 (27%)
IGc2 524..605 CDD:197706 20/80 (25%)
negr1XP_031755650.1 Ig 44..136 CDD:416386 29/99 (29%)
FR1 44..62 CDD:409353 3/13 (23%)
Ig strand A' 47..53 CDD:409353 1/4 (25%)
Ig strand B 55..63 CDD:409353 2/7 (29%)
CDR1 63..68 CDD:409353 0/4 (0%)
FR2 69..75 CDD:409353 2/7 (29%)
Ig strand C 69..74 CDD:409353 2/5 (40%)
CDR2 76..87 CDD:409353 1/10 (10%)
Ig strand C' 78..82 CDD:409353 1/3 (33%)
Ig strand C' 84..87 CDD:409353 0/2 (0%)
FR3 88..122 CDD:409353 14/42 (33%)
Ig strand D 91..98 CDD:409353 2/6 (33%)
Ig strand E 101..107 CDD:409353 2/14 (14%)
Ig strand F 114..122 CDD:409353 3/7 (43%)
CDR3 123..127 CDD:409353 2/3 (67%)
Ig strand G 127..136 CDD:409353 4/9 (44%)
FR4 129..136 CDD:409353 3/6 (50%)
Ig_3 140..208 CDD:404760 23/93 (25%)
Ig strand A' 146..151 CDD:409353 1/6 (17%)
Ig strand B 157..164 CDD:409353 3/6 (50%)
Ig strand C 170..175 CDD:409353 2/10 (20%)
Ig strand C' 177..179 CDD:409353 1/1 (100%)
Ig strand E 187..193 CDD:409353 3/7 (43%)
Ig strand F 200..207 CDD:409353 3/6 (50%)
Ig strand G 214..222 CDD:409353
Ig_3 226..302 CDD:404760
putative Ig strand A 226..232 CDD:409353
Ig strand B 242..246 CDD:409353
Ig strand C 255..259 CDD:409353
Ig strand E 281..285 CDD:409353
Ig strand F 295..300 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 46 1.000 Domainoid score I11916
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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