DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14739 and Ubc10

DIOPT Version :9

Sequence 1:NP_650151.1 Gene:CG14739 / 41467 FlyBaseID:FBgn0037987 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_477414.1 Gene:Ubc10 / 37035 FlyBaseID:FBgn0026316 Length:154 Species:Drosophila melanogaster


Alignment Length:151 Identity:38/151 - (25%)
Similarity:66/151 - (43%) Gaps:23/151 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AGRRLDRDVNRLLASGYRT----TVDDD----MTNLNVCLEGPLGSAYEGGIWTVNVTMPQDYPL 70
            |.|||.::::.|..:..::    ..|||    .|.|.|    |....|..|.:.:.:..|.:||.
  Fly     3 APRRLRKELSDLQGNALKSFRDIKADDDNLLRWTGLIV----PDNPPYNKGAFRIEINFPAEYPF 63

  Fly    71 TAPRVRFVTKILHPNIEFITGLVCMNVLK-QAWSSSYDLVNIFETFLPQLLRYPNPHDSLNHRAA 134
            ..|::.|.|:|.||||: ..|.||:.::. :.|..:.....:.:. |..|:..|.|...|....|
  Fly    64 KPPKINFKTRIYHPNID-EKGQVCLPIISTENWKPATRTDQVVQA-LVDLINDPEPEHPLRAELA 126

  Fly   135 --------AIMKHSEQLFREH 147
                    ..:|::|...::|
  Fly   127 EEFLKDRKKFVKNAEDYTKKH 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14739NP_650151.1 COG5078 12..157 CDD:227410 38/151 (25%)
UQ_con 17..152 CDD:278603 36/148 (24%)
Ubc10NP_477414.1 UQ_con 6..144 CDD:395127 35/143 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24068
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.