DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ssp5 and CG15548

DIOPT Version :9

Sequence 1:NP_650149.1 Gene:ssp5 / 41465 FlyBaseID:FBgn0037985 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_651836.2 Gene:CG15548 / 43667 FlyBaseID:FBgn0039812 Length:814 Species:Drosophila melanogaster


Alignment Length:864 Identity:208/864 - (24%)
Similarity:325/864 - (37%) Gaps:242/864 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KPAPVGASWYTNLSDFQVQAVEALAFSIRDDNAEGTVYRTQFCLSRLGVTPMVKTRMLRKLIGIC 68
            |.|....|||..||..|:.|..||...:|::..:.|.......:.:||:.|....:.|..:|.:.
  Fly    27 KAAERRVSWYRGLSQSQMAAANALFDILRENMDKNTTSNVAKLMVKLGLHPYPPWKTLHMVIKLS 91

  Fly    69 RGSDLAFLYFLMEACYK--GTGSAYS--ERILMSAITFLDLEMTMRELDKILP-PGVERLNKKES 128
            ||:|||||:||||.|||  ..|..||  |:|:|:||..|||..|:||||:.|| |...:.::.: 
  Fly    92 RGNDLAFLWFLMEMCYKTPNHGETYSVNEQIIMTAIFRLDLFPTLRELDRWLPLPHSSQSDRDK- 155

  Fly   129 IAPPVDYRSMSLPTPLPTKRESDL-RKVR-----SPYFTPLPKPKLPKGGEKFTAKRPCLVVSFP 187
             |..:..|:..|......||:.|| ||.:     ||||   .:|.:|   .|...:|..|    .
  Fly   156 -ADALRQRNQRLKKEKEDKRQRDLDRKAKIVKPLSPYF---QEPNIP---GKIRNERKLL----S 209

  Fly   188 FWPAGERPNYKVNEE-------NRWFAAYRFQPV----KRMLFKMVGDIMTDYWTKIDGTQPAEN 241
            .:|......:.::||       :|||..|.....    |.::::.:.:|...:......|:..|:
  Fly   210 DYPDTAATLFHMDEEPLEAYLWSRWFGTYTLNDAHRVGKSIIYEEINNIFESFKAASLPTRHVES 274

  Fly   242 EAMPMCEFHKEALRQEQLVKDAAVVKAHKQCLALVDITSRQDALLKKRIVAQLER---------- 296
                :|..|:.....|:.:||.......::|..|::..:|.:...:||::.:||.          
  Fly   275 ----LCAHHQFIREMEKSLKDKLETMKRRKCEELIEAKNRLEERKRKRVIQELEEMSACYLKRFQ 335

  Fly   297 --------------------------------------DIEEV-TLRWKRLRERHHTDVMLLEDH 322
                                                  |:|:. |...:||.:.|          
  Fly   336 EMAARARLASTSKQLFGGSSVKASYFDCPDNEIRCDDFDVEKCQTFEAERLTKNH---------- 390

  Fly   323 DQMCSVGKVPTAV--QDIRI----------KYLSQEADIGRLSAKPTLGIHVITGRGNVSRLSKV 375
                 :|..|.:.  .:||:          :..|:.....|.|.||.               ||.
  Fly   391 -----IGDTPKSASGNNIRLASGAQAKSKTRSRSRSRSKSRRSRKPQ---------------SKA 435

  Fly   376 R-VSDPDDDIPCPTVP----------VEQKLAKCPPPILGHIKRPRKVSITKSKFGDDKQSSCKK 429
            | :.:|:..:..|.:|          :..:|.:...|||                     ..|  
  Fly   436 RSIKEPEVLVETPVLPPRTAKEDFRDITIRLLEGENPIL---------------------KGC-- 477

  Fly   430 PSKPGRFFEAPHQHSPFVFKYHAVAPQDQNPDTKDVIRAQAIRTLKEQSCPS----SEDNYNG-R 489
               |....|:||.....:|......|  |.|..|.  |..::.... |:|||    .||::|. .
  Fly   478 ---PALQLESPHCAKCLIFDPQKGLP--QKPQKKH--RPSSLMQFL-QNCPSEGNEEEDSHNEMA 534

  Fly   490 INPRDQVVAAIV---------ECAQNMW---FGSL-------------EAHQRRLS--------- 520
            .||....|....         .||:..:   ||||             ||..|.:.         
  Fly   535 ANPSAHSVQEPKLFDLGLLGRNCARFNYRELFGSLQRTHLDDERMRLKEAFVRAIDDDVQYLSAA 599

  Fly   521 -SGQSE------------RPTTIEVPAKNEPEEICKTNDALDWTKTIKK-------FDPNNQHLM 565
             ||:.|            |....:|.|.:|..|......|....|:..:       :||.|..||
  Fly   600 LSGEEEGSLDALVDRAAKRVFAQDVKAFHEELEKMHKQKAAKKYKSDSRLNFGQEFYDPENIPLM 664

  Fly   566 ERLLRDGFSVLRQDPRCVFAAFPDSHKSFVMVEWIKRRYGKTYCH---EEIV--DTIEKGLATFV 625
            :.:||.|...:.||.|.|....||.|....::|||:.||||.|.:   |:|:  |.:.....|::
  Fly   665 KEMLRLGLEKVAQDKRYVLPTLPDVHSVPYLIEWIRLRYGKRYSYGEKEQILNRDKLVMDQITWM 729

  Fly   626 HVENQLNEAPSAKREGFSAKDTFDDFKRLEALCKKLKTEYRMPLNDKILTLTRICWSALSPHLAR 690
            ...|      .||.......|.|.|..:|..|.||.:..:.....:.|:.:.|:.:||:.|||..
  Fly   730 MHTN------LAKIPALPIGDNFTDMTKLRELTKKFRERHTNKFLEAIMEVERVFYSAMKPHLCN 788

  Fly   691 SSSMLKTFFAYLPVRYADM 709
            .::. :||.||||..:.|:
  Fly   789 LATE-ETFLAYLPAHFHDL 806

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ssp5NP_650149.1 DUF4770 47..218 CDD:292613 64/192 (33%)
DUF4771 555..709 CDD:292614 50/165 (30%)
CG15548NP_651836.2 DUF4770 70..248 CDD:292613 63/189 (33%)
DUF4771 654..806 CDD:292614 50/158 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2C9W7
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0009976
OrthoInspector 1 1.000 - - otm49876
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR41967
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.000

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