DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spt3 and TAF13

DIOPT Version :9

Sequence 1:NP_650146.1 Gene:Spt3 / 41461 FlyBaseID:FBgn0037981 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_013611.1 Gene:TAF13 / 854875 SGDID:S000004564 Length:167 Species:Saccharomyces cerevisiae


Alignment Length:132 Identity:29/132 - (21%)
Similarity:65/132 - (49%) Gaps:15/132 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 EIADIMRSFGDSDQPRTGSVKLVEQILQQQLRGIFNEASLVAMRRKQNPCPSQADFEFLMRNHPV 169
            :::.::.::||..||...:|:.:::::...|..:...|...|...::|....: ||:|.:|..|:
Yeast    14 DVSSLLYAYGDVPQPLQATVQCLDELVSGYLVDVCTNAFHTAQNSQRNKLRLE-DFKFALRKDPI 77

  Fly   170 KIARMRKHLKDMRIL----KRF------LSIRTGRPQDFMDDLEQQEEDEELAIDVYELHDEDRM 224
            |:.|..:.:...:::    |:|      .|::..|.:|...|..:::|||:...|    .||:..
Yeast    78 KLGRAEELIATNKLITEAKKQFNETDNQNSLKRYREEDEEGDEMEEDEDEQQVTD----DDEEAA 138

  Fly   225 RR 226
            .|
Yeast   139 GR 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spt3NP_650146.1 TAF13 99..190 CDD:173962 18/94 (19%)
TAF13NP_013611.1 TAF19 1..133 CDD:227573 26/123 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2300
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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