DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spt3 and TAF13

DIOPT Version :10

Sequence 1:NP_650146.1 Gene:Spt3 / 41461 FlyBaseID:FBgn0037981 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_171768.2 Gene:TAF13 / 837962 AraportID:AT1G02680 Length:126 Species:Arabidopsis thaliana


Alignment Length:107 Identity:30/107 - (28%)
Similarity:49/107 - (45%) Gaps:4/107 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 AGGASGSNVANVLIPDDAPVSLL-TEIADIMRSFGDSDQPRTGSVKLVEQILQQQLRGIFNEASL 144
            |..:|.|..|....|.:...:|. .|:..:|..|||...|...||.|||.|:.:.:..:.::|..
plant     9 ASSSSKSKAAGTSQPQEKRKTLFQKELQHMMYGFGDEQNPLPESVALVEDIVVEYVTDLTHKAQE 73

  Fly   145 VAMRRKQNPCPSQADFEFLMRNHPVKIARMRKHLKDMRILKR 186
            :..:|.:....   ||.:|:|....|:.|.|:.|.....||:
plant    74 IGSKRGRLLVD---DFLYLIRKDLPKLNRCRELLAMQEELKQ 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spt3NP_650146.1 HFD_TAF13 101..178 CDD:467023 22/77 (29%)
TAF13NP_171768.2 HFD_TAF13 30..104 CDD:467023 22/76 (29%)

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