Protein Alignment GCC185 and AT1G52380

DIOPT Version :10

• Sequence 1: NP_001097755.1
• Gene: GCC185 / 41459
• FlyBaseID: FBgn0037979
• Length: 1135
• Species: Drosophila melanogaster
• Sequence 2: NP_564606.1
• Gene: AT1G52380 / 841668
• AraportID: AT1G52380
• Length: 440
• Species: Arabidopsis thaliana
• Alignment Length: 472
• Identity: 87/472 - (18%)
• Similarity: 163/472 - (34%)
• Gaps: 140/472 - (29%)

  Fly   537 EQTQQLNEMEQSGALKEELEAIKLAQAQLQQDLNAARAENQKLKSKEKVKHSSVLNLEIEAAEKS 601
            |..||  ..::.||||:    :......|..|.::|..|:...|.......:|...:.::..|.|
plant     5 ENVQQ--PSKKRGALKQ----LSRDNPGLDDDDDSAELESGTFKKASDEVLASRRIVRVKRKEPS 63

  Fly   602 LSEVSAK----------LTAKSSELEAVKESLASKENTIVQLRKEIAILEEAKNGEAAHSLELKE 656
            .:.|:|.          .||.:|........||..     :|....|::|:   .:.|..:|..:
plant    64 AAPVAASNPFAGIQLVPTTAPASTPVGTNAPLAES-----KLAPAEAVVED---NQKASDIEEGD 120

  Fly   657 QIDRMQVQVKDAVHSKQQALTQNKDLEHGVEQAKLEAEQLRLQLSESAQQYESKLNTATQQLLSQ 721
            ::|..:|.||||| .::...|::||..|..:.|     .:::..:|.||......|.. ...:..
plant   121 EVDSKKVDVKDAV-GEETEKTKDKDDNHCGKSA-----DVQVAATEVAQMVSCDTNVC-NNAVEG 178

  Fly   722 TQELEMHL--------AEQKRLE----------------------TALRNAERALEDLRVEYTEY 756
            |.:.:..|        ||:|..|                      ::.:||...|.......:.:
plant   179 TDQTDFPLEKDSGGDQAEKKEKEGNGIEEADKNGDNGAFSSFQQHSSNKNAFTGLASTEASGSSF 243

  Fly   757 KL------------------------------KAQSVLRKNQNKGSNREQEL------EEELVAL 785
            ..                              ...|:::|::..|...:||:      |.|.||.
plant   244 SFGLVSQDGSTGTGSLFGFGLPSSNSSSIFGATGSSIIKKSEGSGFPPKQEVSTETGEENEKVAF 308

  Fly   786 R-------------------ESERNLRASNDGRAA---------RLAQLDSQIEELRQDNTDLQK 822
            .                   |.:.|: :||||:|.         ||....|...|::..|.|.:.
plant   309 SADSIMFEYLDGGWKERGKGELKVNV-SSNDGKARLVMRAKGNYRLILNASLYPEMKLANMDKKG 372

  Fly   823 RSKELVSLVDELRQQNDLLSLENQRQLQFQHDLMQQHRQQVDELDAGHQLQLTQVQEQLEEAQKM 887
            .:...|:.|.|.::.....:|:.:     ...::::.|..:|:    |     :..:.:|:|.:.
plant   373 ITFACVNSVSEGKEGLSTFALKFK-----DPTIVEEFRVAIDK----H-----KDSKPMEKAAEK 423

  Fly   888 QANVSQHTTASAASVDT 904
            .|...:....|..:.||
plant   424 SALPLKTPENSPTATDT 440

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
GCC185	NP_001097755.1	PRK03918	<33..559	CDD:235175	7/21 (33%)
		Smc	<357..>920	CDD:440809	87/472 (18%)
		Grip	1057..1103	CDD:197860
AT1G52380	NP_564606.1	NUP50	13..77	CDD:462629	14/67 (21%)
		Nucleoporin_FG	221..289	CDD:463941	5/67 (7%)
		RanBD_NUP50_plant	299..415	CDD:269990	24/130 (18%)