DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GCC185 and ATGRIP

DIOPT Version :9

Sequence 1:NP_001097755.1 Gene:GCC185 / 41459 FlyBaseID:FBgn0037979 Length:1135 Species:Drosophila melanogaster
Sequence 2:NP_851277.1 Gene:ATGRIP / 836733 AraportID:AT5G66030 Length:788 Species:Arabidopsis thaliana


Alignment Length:853 Identity:204/853 - (23%)
Similarity:369/853 - (43%) Gaps:199/853 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   339 DKEQLISVTKEQENTKNHARNLNVSLFQTKLDQMQNLVKVIAKERDNQQRKLQELEAICIELRQH 403
            |||..:...:|:.:.....:.||.:..:|..:....|:::||                  |||..
plant     4 DKESDVVGEEEESHVIKEDKELNDASNETLTENGDQLLQMIA------------------ELRLE 50

  Fly   404 NEDLLTRYH-LKEQEHGELLTEMRELNEALKGRGDA--ISRLQEQHEAEVKRQRDLEAQLSNSQQ 465
            |:.|.:::. ||::     :.:.|.|.:|.:...|:  :.:|||| .|.:.|:.|:|.|   ::.
plant    51 NDFLRSQFEGLKDE-----VAQGRSLQKAEQVEADSAQLKQLQEQ-VASLSREIDVEKQ---TRV 106

  Fly   466 AAQEKLQKIKQLQSRVEELEQANADAQSDVLSTSTISRAEEL--SRLRELDEGYEEKYHKLRAIA 528
            ||::.|:.:::..|        .|||:|...| |..|:.|:.  ..::|.||.|.:...|...:.
plant   107 AAEQALEHLREAYS--------EADAKSQEYS-SKFSQVEQKLDQEIKERDEKYADLDAKFTRLH 162

  Fly   529 AKLKKKLQEQTQQLNEME---------------QSGALKEELEAIKLAQAQLQQDLNAARAENQK 578
            .:.|:::||..::.::::               |..::::|||.   .:.|..:.|.|..||.|:
plant   163 KRAKQRIQEIQKEKDDLDARFREVNETAERASSQHSSMQQELER---TRQQANEALKAMDAERQQ 224

  Fly   579 LKS-KEKVKHSSVLNLEIEAAEKSLSEVSAKLTAKSSELEAVKESLASKENTIVQLRKEIAILEE 642
            |:| ..|::             .::.|:...|..|.:::|.:::||..|:..:..|:|::..:||
plant   225 LRSANNKLR-------------DTIEELRGSLQPKENKIETLQQSLLDKDQILEDLKKQLQAVEE 276

  Fly   643 AKNGEAAHSLELKEQ--IDRMQVQVKDAVH---------SKQQALTQNKDLEHGVEQAKLEAEQL 696
            .|. .|...|..|.|  ::.::.||.||:.         |..|.|...|:.:....:|....|..
plant   277 RKQ-IAVTELSAKHQKNLEGLEAQVVDALSERDKAAETISSLQVLLAEKESKIAEMEAAATGEAA 340

  Fly   697 RLQL-------------SESAQQYE----------SKLNTATQQLLS---QTQELEMHLAEQKRL 735
            ||:.             ||:.::.|          |||..|....|.   :..::...|..:..:
plant   341 RLRAAAETLKGELAHLKSENEKEKETWEASCDALKSKLEIAESNYLQAEIEVAKMRSQLGSEMSM 405

  Fly   736 ET--------ALRNAERALEDLRVEYTEYKLKAQSVLRKNQ-----NKGSNREQELEEELVALRE 787
            :|        .|:.|...:..|:.|::.||::|.::|:|..     .|.|.:.:.|||   ||:|
plant   406 QTQILSTKDAELKGAREEINRLQSEFSSYKIRAHALLQKKDMELAAAKDSEQIKSLEE---ALKE 467

  Fly   788 SERNL--------RASNDGRAARLAQLDSQIEELRQDNTDLQKRSKELVSLVDELRQQNDLLSLE 844
            :|:.:        ||..|.::| ||.|:.::||..   ..|:..|:::.||..:|    |.....
plant   468 AEKEVYLVSAERDRAQQDLQSA-LASLEKELEERA---GALKDASEQIKSLEVKL----DSTVAR 524

  Fly   845 NQRQLQ-FQHDLMQQHRQQVDELDAGHQLQLTQVQEQLEEA--QKMQANVSQHTTASAASVDTSP 906
            ||.:.| ::.||                       ..|||.  ::.:|..:|:..:.|..::...
plant   525 NQAEKQAWEEDL-----------------------RVLEETWRRRCEALTAQNEASPAEGIEKEL 566

  Fly   907 EQAKIDYLLMDHETGLDGHAGDVSLAQLAAQRKISTASRRSHDFMPLDELLN--TSMNQ--ITSD 967
            |.||:....|..|     |.....||....:.|....||.      :||:.|  .||..  :.:.
plant   567 ENAKLRNKRMKEE-----HESVRELADRLIEEKDREISRL------VDEMTNLRKSMESKPVWNK 620

  Fly   968 TVTTISNFG--RSVSQQEDEE--AEMAARGDFSVQSAQLQATKERLSIQESRVKHLTAL---LAE 1025
            :.:.:.::|  .:.|||:|..  :..||.....:.:.| ||.:|....|..|  |:.||   :.|
plant   621 SPSQVHHYGNNNTESQQQDVSNLSTSAAEHQILILARQ-QAQREEELAQTQR--HILALQEEIEE 682

  Fly  1026 NEQDLAKLTQMNDMLKEELRRQERSEEREQHMHNSEYLKNVFLKFLTLNNVDERQRLVPVLNTIL 1090
            .|::....:|...:||.|||..||.::||.  .:..|||||.||.|....|   :.|:||:..:|
plant   683 LERENRLHSQQEAVLKTELREMERKQKREG--VDMTYLKNVILKLLETGEV---EALLPVVGMLL 742

  Fly  1091 RLSRNEME 1098
            :.|..|::
plant   743 QFSPEEIQ 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GCC185NP_001097755.1 SMC_prok_B 35..813 CDD:274008 127/552 (23%)
TMPIT 458..>548 CDD:285135 21/106 (20%)
GRIP 1058..1100 CDD:279767 15/41 (37%)
ATGRIPNP_851277.1 TMPIT 166..>257 CDD:285135 20/106 (19%)
Grip 712..755 CDD:197860 15/44 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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