DRSC/TRiP Functional Genomics Resources

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Protein Alignment GCC185 and RGPD2

DIOPT Version :9

Sequence 1:NP_001097755.1 Gene:GCC185 / 41459 FlyBaseID:FBgn0037979 Length:1135 Species:Drosophila melanogaster
Sequence 2:XP_016860334.1 Gene:RGPD2 / 729857 HGNCID:32415 Length:1917 Species:Homo sapiens


Alignment Length:1623 Identity:276/1623 - (17%)
Similarity:516/1623 - (31%) Gaps:608/1623 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 ELTEENHRLKDALKRAAEKQ-----------------------SSLPAMQEMVQDFTDKNLILTE 85
            ||...|.|||||:.|..|.:                       .||..::....|:...|..|..
Human   333 ELYRSNKRLKDAVARCHEAERNIALRSSLEWNSCVVQTLKEYLESLQCLESDKSDWRATNTDLLL 397

  Fly    86 EVNNL------KRKTKEDADRLTQFEIENESLKRQLGRLSDENDALLANVDRME----------- 133
            ...||      .|..:|..:.|..|:...:|.|..||    .||.|.|....|:           
Human   398 AYANLMLLTLSTRDVQESRELLESFDSALQSAKSSLG----GNDELSATFLEMKGHFYMHAGSLL 458

  Fly   134 ------------KAMQQVNAL-----------------GNEQRKNLELLEVDIAK------IKEA 163
                        :|:.::.||                 |...:..||::..|...      :..:
Human   459 LKMGQHGNNVQWQALSELAALCYVIAFQVPRPKIKLIKGEAGQNLLEMMACDRLSQSGHMLLNLS 523

  Fly   164 EAENASLRQQVATMEEES--SVLQQKYQNIKELNSEQRKKFNSLKD-RFIDVHR-KLKNLKECKC 224
            ..:...|::.|.|...:|  |||   |..:....|.:...|....| ..|||.. :|::|.....
Human   524 RGKQDFLKEVVETFANKSGQSVL---YNALFSSQSSKDTSFLGSDDIGNIDVQEPELEDLARYDV 585

  Fly   225 VLLET-----QH-----------EYAASVSKWQVEII------------KASQLLC--------- 252
            ..::.     ||           .....:.||..::.            .|.:.:|         
Human   586 GAIQAHNGSLQHLTWLGLQWNSLPALPGIRKWLKQLFHHLPQETSRLETNAPESICILDLEVFLL 650

  Fly   253 --AKMASLQAENEKLKLNNGKSDNNPQTIDTGIDRKRLLQRVQE-MDRLAKIVKQKQ---KNQRS 311
              ...:.||.   |.|.|:..|...|..:...:.::...:|.:. .|.:..::.:|.   .:...
Human   651 GVVYTSHLQL---KEKCNSHHSSYQPLCLPLPVCKRLCTERQKSWWDAVCTLIHRKAVPGNSAEL 712

  Fly   312 NLNVEYLLKKITALEELAVIIKQQHRIDKEQLISVTKEQENTKNHARNLNVSLFQTKL------- 369
            .|.|::.:..:.|        :::|.:....|:...|   ..:...|.||.|..|.:.       
Human   713 RLVVQHEINTLRA--------QEKHGLQPALLVHWAK---CLQKMGRGLNSSYDQQEYIGRSVHY 766

  Fly   370 -DQMQNLVKVIAKER-----DNQQRKLQELEAICIELRQHNEDLLTRYHLKEQEHGELLTEMREL 428
             .::..|:|:|.|..     |...:....::....|:.::.||....:.:.:..||.:...:...
Human   767 WKKVLPLLKIIKKNSIPEPIDPLFKHFHSVDIQASEIVEYEEDAHITFAILDAVHGNIEDAVTAF 831

  Fly   429 NEALKG------------------RGDAISRLQEQHEAE--VKRQRDLEAQL---SNSQQAAQEK 470
             |::|.                  ..||:.. :||.|.:  :::.||...::   |:|..:..:|
Human   832 -ESIKSVVSYWNLALIFHRKAEDIENDAVFP-EEQEECKNYLRKTRDYLIKIIDDSDSNLSVVKK 894

  Fly   471 ----LQKIKQ-LQSRVEELEQ-------------ANADAQ------------------------- 492
                |:.:|: |:|.::|||.             .|||::                         
Human   895 LPVPLESVKEMLKSVMQELEDYSEGGPLYKNGSLRNADSEIKHSTPSPTKYSLSPSKSYKYSPKT 959

  Fly   493 ----------------SDVLSTSTISRAEELSRLR---------ELDEGYE--EKYH-------- 522
                            .:|.:.:.::.::..||.|         .:.:||:  :.:|        
Human   960 PPRWAEDQNSLRKMICQEVKAITKLNSSKSASRHRWPTENYGPDSVPDGYQGSQTFHGAPLTVAT 1024

  Fly   523 -----------------KLRAIAAKLKKKLQEQTQQLNEMEQSGALKEELEAIKLAQAQLQQDLN 570
                             .||..|.....|....|:          .|...|...:|.:.......
Human  1025 TGPSVYYSQSPAYNSQYLLRPAANVTPTKGSSNTE----------FKSTKEGFSIAVSADGFKFG 1079

  Fly   571 AARAENQKLKSKEKVKHSSVLNLEIEAAEKS-----LSEVSAKLT----AKSSELEAVK------ 620
            .:...||:.||::.:::.:....:..:.:|:     ..:.|:..|    |||:..|..:      
Human  1080 ISEPGNQEKKSEKPLENDTGFQAQDISGQKNGRGVIFGQTSSTFTFADVAKSTSGEGFQFGKKDP 1144

  Fly   621 -----------------ESLASKENT-----------------------IVQLRKEIAILEEAKN 645
                             ..:|:|.||                       :||:.:::.::...:.
Human  1145 NFKGFSGAGEKLFSSQCGKMANKANTSGDFEKDDDACKTEDSDDIHFEPVVQMPEKVELVTGEEG 1209

  Fly   646 GEAAHSLELKEQIDRMQVQV--------------KDAVHSKQQAL-----------------TQN 679
            .:..:|..:|  :.|...::              |:.|:.|.:.|                 |.|
Human  1210 EKVLYSQGVK--LFRFDAEISQWKERGLGNLKILKNEVNGKPRMLMRRDQVLKVCANHWITTTMN 1272

  Fly   680 ---------------KDLEHGVEQAKLEAEQLRLQLSESAQQYESKLNTATQQLLSQTQELEMHL 729
                           .|...|  .||||....:.:..|.|::::.|.....:.||....:....|
Human  1273 LKPLSGSDRAWMWLASDFSDG--DAKLERLAAQFKTPELAEEFKQKFEECQRLLLDIPLQTPHKL 1335

  Fly   730 AEQKRLETALRNAERALEDLRVEYTEYKLKAQSVLRKNQNKGS-----------------NREQE 777
            .:..|....::.||.....|: ::..:....|:.:.:.:||||                 |....
Human  1336 VDTGRAAKLIQRAEEMKSGLK-DFKTFLTNDQTKVTEEENKGSGTGAAGASDTTIKPNPENTGPT 1399

  Fly   778 LEEELVALRES--ERNLRASN-----------------------------------DGRAARLAQ 805
            ||.:...|||.  :.|:.:|:                                   ....|:|.|
Human  1400 LEWDNYDLREDALDDNVSSSSVHDSPLASSPVRKNIFRFDESTTGFNFSFKSALSLSKSPAKLNQ 1464

  Fly   806 LDSQI---EELRQDNTDLQKRSKELVSLVDELRQQNDLLSLENQRQLQFQH-------------- 853
            ..:.:   ||  .|.|..::|..:....|..|....::.|.|...|:.|.|              
Human  1465 SGTSVGTDEE--SDVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHMAELYRYDKDVGQW 1527

  Fly   854 --------DLMQQH----------RQQVDELDAGHQL---------------------------- 872
                    .::|.:          |.||.:|.|.|::                            
Human  1528 KERGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVWTACDFADGER 1592

  Fly   873 ----------------QLTQVQEQLEEAQKMQANVSQHTTASAASVDTSPEQA---KIDYLLMDH 918
                            ...::.::.:.||:..:.::.|.:.|     ::|.::   ||...:::.
Human  1593 KVEHLAVRFKLQDVADSFKKIFDEAKTAQEKDSLITPHVSRS-----STPRESPCGKIAVAVLEE 1652

  Fly   919 ET--GLDGHAGDVSLAQLAAQRKIST--------------------------ASRRSHDF----- 950
            .|  ..|...|| .:|..|::.::|:                          :|.:|:.|     
Human  1653 TTRERTDVIQGD-DVADAASEVEVSSTSETTTKAVVSPPKFVFGSESVKRIFSSEKSNPFAFGNS 1716

  Fly   951 MPLDELLNTSMNQ--ITSDTVTTISNFGRSVSQQEDEEAEMAARGD---------------FSVQ 998
            .....|...|.|.  .::|:.|:......|.|:.|.::.|::...|               |.::
Human  1717 SATGSLFGFSFNAPLKSNDSETSSVAQSGSESKVEPKKCELSKNSDIEQSSDSKVKNLSASFPME 1781

  Fly   999 SAQL----------------QATKE----RLSIQESRVKHLTALLAENEQDLAKLTQMNDMLKEE 1043
            .:.:                :.|||    :||........|..||.|.|...|.|.:...:||.|
Human  1782 ESSINYTFKTPEKEPPLWHAEFTKEELVQKLSSTTKSADQLNGLLRETEATSAVLMEQIKLLKSE 1846

  Fly  1044 LRRQERSEEREQHMHNSEYLKNVFLKFLTLNNVDERQRLVPVLNTILRLSRNEMEMLNCVAKG 1106
            :||.||::  |:...|.|:||||.|:|:.|....||:.|:||:||:|:||..|...|..||:|
Human  1847 IRRLERNQ--EESAANVEHLKNVLLQFIFLKPGSERESLLPVINTMLQLSPEEKGKLAAVAQG 1907

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GCC185NP_001097755.1 SMC_prok_B 35..813 CDD:274008 186/1179 (16%)
TMPIT 458..>548 CDD:285135 25/187 (13%)
GRIP 1058..1100 CDD:279767 20/41 (49%)
RGPD2XP_016860334.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 46 1.000 Domainoid score I12111
eggNOG 1 0.900 - - E1_COG5171
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm41740
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.900

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